RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NR2F1P10589 423 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ETS2P15036 469 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 GDF1P27539 372 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 SRD5A2P31213 254 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 GZMMP51124 257 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 CRISP3P54108 245 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 SUMO3P55854 103 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 DSCR4P56555 118 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 RBBP4Q09028 425 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 FGFBP1Q14512 234 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 GPR68Q15743 365 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 CD226Q15762 336 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ADRM1Q16186 407 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF630Q2M218 657 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 MMEL1Q495T6 779 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 GPAT3Q53EU6 434 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ARHGAP11AQ6P4F7 1023 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 TRILQ7L0X0 811 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 FGD2Q7Z6J4 655 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 SERPINA11Q86U17 422 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 CMIPQ8IY22 773 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 FAM71CQ8NEG0 241 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 TOR1AIP2Q8NFQ8 470 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 NEIL3Q8TAT5 605 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 RCN3Q96D15 328 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ZG16BQ96DA0 208 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 JSRP1Q96MG2 331 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 TREX2Q9BQ50 279 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 GPATCH1Q9BRR8 931 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 THUMPD3Q9BV44 507 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 SPATA9Q9BWV2 254 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 DEFB127Q9H1M4 99 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 PTGES2Q9H7Z7 377 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 EFCAB1Q9HAE3 211 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 FBXL2Q9UKC9 423 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 ICAM5Q9UMF0 924 aa8.76□□□□□ -1.01
RABGGTA-221ENST00000561055 INTS1Q8N201 2190 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 C15orf38-AP3S2A0A0A6YYH1 394 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 NPIPA5A0A0B4J1W7 369 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 C7orf72A4D263 438 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CLEC18AA5D8T8 446 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 SERINC4A6NH21 518 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 NPIPA7E9PJI5 369 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 LINC01387J3KSC0 135 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 PGM3O95394 542 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 BCHEP06276 602 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 DBIP07108 87 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 THBS1P07996 1170 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 STSP08842 583 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CELA3AP09093 270 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 NUDT7P0C024 238 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 NPIPA8P0DM63 369 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC6A2P23975 617 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CHMP24386 653 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 PGM1P36871 562 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 P2RX1P51575 399 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 KCNJ10P78508 379 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 HPCAP84074 193 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 RBPJQ06330 500 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 MAPK14Q16539 360 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 ZSWIM7Q19AV6 140 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 TMEM44Q2T9K0 475 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 PDZK1Q5T2W1 519 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 VASNQ6EMK4 673 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 OR5M10Q6IEU7 315 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 REEP3Q6NUK4 255 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CLEC18BQ6UXF7 455 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 GFRALQ6UXV0 394 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 ARPINQ7Z6K5 226 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CALHM3Q86XJ0 350 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 PTOV1Q86YD1 416 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 SPPL2CQ8IUH8 684 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 GRAMD2AQ8IUY3 354 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC30A8Q8IWU4 369 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 POU5F2Q8N7G0 328 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CLEC18CQ8NCF0 446 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 CCDC197Q8NCU1 140 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 FAM83FQ8NEG4 500 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 ARSGQ96EG1 525 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 TMEM19Q96HH6 336 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 HOPXQ9BPY8 73 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 LAT2Q9GZY6 243 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 TSPAN10Q9H1Z9 355 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 DSN1Q9H410 356 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 EXOSC3Q9NQT5 275 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 MED11Q9P086 117 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 SLC35A3Q9Y2D2 325 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 AP3M1Q9Y2T2 418 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 L3MBTL1Q9Y468 752 aa8.75□□□□□ -1.01
RABGGTA-221ENST00000561055 MYO18BQ8IUG5 2567 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 A0A087WZY1 265 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 CENPVL1A0A0U1RR11 272 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 A0A1B0GTH9 108 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 C17orf51A8MQB3 221 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 ETV2O00321 342 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 BCKDKO14874 412 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 ZNF264O43296 627 aa8.74□□□□□ -1.01
RABGGTA-221ENST00000561055 WISP1O95388 367 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms