RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZCCHC3Q9NUD5 404 aaKnown RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 MED17Q9NVC6 651 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 PAQR5Q9NXK6 330 aaPredicted RBP14.55□□□□□ -0.08
SNX1-213ENST00000561026 SLC17A7Q9P2U7 560 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 GIMAP2Q9UG22 337 aa14.55□□□□□ -0.08
SNX1-213ENST00000561026 SCDO00767 359 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 SCAMP2O15127 329 aaKnown RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 PEX11AO75192 247 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 HSPA4LO95757 839 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 HMGN2P05204 90 aaKnown RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 NUDT17P0C025 328 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 MAPK1P28482 360 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 HPCAL1P37235 193 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 RPL3P39023 403 aaKnown RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 ZNF41P51814 821 aaPredicted RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 RAC1P63000 192 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 NKX6-1P78426 367 aaPredicted RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 PLPPR5Q32ZL2 321 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 XKR7Q5GH72 579 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 C22orf34Q6ZV56 151 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 ZNF550Q7Z398 422 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 KRTAP1-3Q8IUG1 177 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 OR7A2PQ8NGA2 310 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 AGR3Q8TD06 166 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 JADE3Q92613 823 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 PIK3IP1Q96FE7 263 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 GMPPAQ96IJ6 420 aaPredicted RBP14.54□□□□□ -0.08
SNX1-213ENST00000561026 MARK4Q96L34 752 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 STACQ99469 402 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 BTBD2Q9BX70 525 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 ANKZF1Q9H8Y5 726 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 GIN1Q9NXP7 522 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 EMC9Q9Y3B6 208 aa14.54□□□□□ -0.08
SNX1-213ENST00000561026 A0A1W2PQD3 144 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 PLGP00747 810 aaPredicted RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 OPN1LWP04000 364 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 LAMP1P11279 417 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 HOXB4P17483 251 aaPredicted RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 IL11P20809 199 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 POU6F2P78424 691 aaPredicted RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 LASP1Q14847 261 aaKnown RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 CD226Q15762 336 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 ATP6AP1LQ52LC2 224 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 SHEQ5VZ18 495 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 PPP4R4Q6NUP7 873 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 ZCCHC23Q6ZST2 131 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 ESPNLQ6ZVH7 1005 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 OR6K3Q8NGY3 331 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 B4GALNT2Q8NHY0 566 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 PSMA8Q8TAA3 256 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 TCP10LQ8TDR4 215 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 CDS1Q92903 461 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 ZC3HAV1LQ96H79 300 aaKnown RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 SH3YL1Q96HL8 342 aaPredicted RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 RNF145Q96MT1 663 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 PIP5K1AQ99755 562 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 KLHDC3Q9BQ90 382 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 KLHL4Q9C0H6 718 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 PIGUQ9H490 435 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 LGALS13Q9UHV8 139 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 MCTS1Q9ULC4 181 aaKnown RBP14.53□□□□□ -0.08
SNX1-213ENST00000561026 SNX8Q9Y5X2 465 aa14.53□□□□□ -0.08
SNX1-213ENST00000561026 A0A0J9YW62 118 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 CXCL13O43927 109 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 SS18L1O75177 396 aaPredicted RBP14.52□□□□□ -0.08
SNX1-213ENST00000561026 SPAG7O75391 227 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 SLU7O95391 586 aaKnown RBP14.52□□□□□ -0.08
SNX1-213ENST00000561026 ME2P23368 584 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 ARRB2P32121 409 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 SERPINB5P36952 375 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 CCT3P49368 545 aaKnown RBP14.52□□□□□ -0.08
SNX1-213ENST00000561026 CTBP2P56545 445 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 PTGR1Q14914 329 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 EXOC3L2Q2M3D2 409 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 C6orf136Q5SQH8 315 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 ANKRD34AQ69YU3 496 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 OR2V1Q8NHB1 315 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 POC1BQ8TC44 478 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 OR5P2Q8WZ92 322 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 CAVIN3Q969G5 261 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 PIGTQ969N2 578 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 CHMP6Q96FZ7 201 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 C18orf12Q96KH6 178 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 C3orf30Q96M34 536 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 GLRX2Q9NS18 164 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 CLEC4AQ9UMR7 237 aa14.52□□□□□ -0.08
SNX1-213ENST00000561026 ARID1AO14497 2285 aa14.52□□□□□ -0.09
SNX1-213ENST00000561026 TNFSF11O14788 317 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ARHGEF9O43307 516 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 LYPLA1O75608 230 aaPredicted RBP14.51□□□□□ -0.09
SNX1-213ENST00000561026 SYNGR4O95473 234 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 LINGO3P0C6S8 592 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 EIF1P41567 113 aaKnown RBP14.51□□□□□ -0.09
SNX1-213ENST00000561026 ACKR1Q16570 336 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 KLHL26Q53HC5 615 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 IL23RQ5VWK5 629 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 HBMQ6B0K9 141 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 CDC73Q6P1J9 531 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 MTERF4Q7Z6M4 381 aaKnown RBP14.51□□□□□ -0.09
SNX1-213ENST00000561026 BIVMQ86UB2 503 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms