RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RAB39AQ14964 217 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 NEDD8Q15843 81 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 NNATQ16517 81 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 PHF19Q5T6S3 580 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 GTF2IRD2BQ6EKJ0 949 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 RASSF6Q6ZTQ3 369 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 OVCH1Q7RTY7 1134 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 GTF2IRD2Q86UP8 949 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 BMPERQ8N8U9 685 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 OR13F1Q8NGS4 319 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 TMEM255BQ8WV15 326 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 CLIP3Q96DZ5 547 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 NXF5Q9H1B4 397 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 SLC26A1Q9H2B4 701 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 SLC25A19Q9HC21 320 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 OCIAD1Q9NX40 245 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 SERINC4A6NH21 518 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TO15178 435 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 FLRT2O43155 660 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 SEC14L2O76054 403 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 LDOC1O95751 146 aaPredicted RBP11.9□□□□□ -0.5
SNX1-211ENST00000560829 CYC1P08574 325 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 IGFBP1P08833 259 aaPredicted RBP11.9□□□□□ -0.5
SNX1-211ENST00000560829 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 CSTF2P33240 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNX1-211ENST00000560829 STAT5AP42229 794 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 GPR143P51810 404 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 CDK5Q00535 292 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 PIGFQ07326 219 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 KLHL26Q53HC5 615 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TMEM201Q5SNT2 666 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TCEAL6Q6IPX3 200 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 ZNF550Q7Z398 422 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 MRGPREQ86SM8 312 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 C9orf40Q8IXQ3 194 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 PRSS58Q8IYP2 241 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 ALDH16A1Q8IZ83 802 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 POGLUT1Q8NBL1 392 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 AGBL5Q8NDL9 886 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 C17orf47Q8NEP4 570 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 OR4C3Q8NH37 302 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TCEAL3Q969E4 200 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TRIM2Q9C040 744 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 APMAPQ9HDC9 416 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 KRCC1Q9NPI7 259 aaPredicted RBP11.9□□□□□ -0.5
SNX1-211ENST00000560829 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 COPS7AQ9UBW8 275 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 RSL24D1Q9UHA3 163 aaKnown RBP11.9□□□□□ -0.5
SNX1-211ENST00000560829 MRTO4Q9UKD2 239 aaKnown RBP11.9□□□□□ -0.5
SNX1-211ENST00000560829 SLC35A3Q9Y2D2 325 aa11.9□□□□□ -0.5
SNX1-211ENST00000560829 RP1P56715 2156 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 C2orf92A0A1B0GVN3 265 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 A0A1B0GX12 115 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CLCA1A8K7I4 914 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 EFCAB7A8K855 629 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 RGS10O43665 173 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ADAM11O75078 769 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 SPTBP11277 2137 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 GIPRP48546 466 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 PSPHP78330 225 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 MVKQ03426 396 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 FNDC7Q5VTL7 733 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 LANCL3Q6ZV70 420 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 PTCHD4Q6ZW05 846 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 KIF18BQ86Y91 864 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 NRMQ8IXM6 262 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CLDN22Q8N7P3 220 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF441Q8N8Z8 693 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 OR8J1Q8NGP2 316 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 WDR36Q8NI36 951 aaKnown RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF420Q8TAQ5 688 aaPredicted RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 MUL1Q969V5 352 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 LMF1Q96S06 567 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF426Q9BUY5 554 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 UBQLN4Q9NRR5 601 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 ZNF223Q9UK11 482 aaPredicted RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 PPIEQ9UNP9 301 aaKnown RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 COMMD3-BMI1R4GMX3 469 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 PI4KAP42356 2102 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 NUP210LQ5VU65 1888 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 BDP1A6H8Y1 2624 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 LNP1A1A4G5 178 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 IDSB3KWA1 339 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CHP2O43745 196 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 CPNE3O75131 537 aaKnown RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 NTN1O95631 604 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 RNF144AP50876 292 aaPredicted RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 EFNB1P98172 346 aa11.89□□□□□ -0.51
SNX1-211ENST00000560829 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
SNX1-211ENST00000560829 GINS1Q14691 196 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms