RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 BTNL2Q9UIR0 455 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF337Q9Y3M9 751 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 CACNA1DQ01668 2161 aa11.74□□□□□ -0.53
CTDSPL2-209ENST00000560620 A0A1W2PQD3 144 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CCDC154A6NI56 674 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 EEF1E1-BLOC1S5C9J1V9 151 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 RFXANKO14593 260 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 EEF1E1O43324 174 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 SCN2BO60939 215 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 STX11O75558 287 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CYP7B1O75881 506 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 AGR2O95994 175 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 AK1P00568 194 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 IL6P05231 212 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 GSNP06396 782 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 TMIGD3P0DMS9 266 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 OR12D1P0DN82 309 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF708P17019 499 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 IL12AP29459 219 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 KHKP50053 298 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CCR4P51679 360 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 ATP12AP54707 1039 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 EEFSECP57772 596 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 B3GALT5-AS1P59052 145 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 LRRC74AQ0VAA2 488 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 SGCBQ16585 318 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 PDCD4Q53EL6 469 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 DNAJC14Q6Y2X3 702 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 GDF7Q7Z4P5 450 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 MTERF4Q7Z6M4 381 aaKnown RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 GCNT2Q8N0V5 402 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 MIER2Q8N344 545 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 GOT1L1Q8NHS2 421 aaPredicted RBP11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 RFWD2Q8NHY2 731 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 RAB8BQ92930 207 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CCDC115Q96NT0 180 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 SDF2Q99470 211 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 TM9SF2Q99805 663 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 SERHL2Q9H4I8 314 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 TCF7L2Q9NQB0 619 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 MKLN1Q9UL63 735 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CARD8Q9Y2G2 431 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 CENPEQ02224 2701 aa11.73□□□□□ -0.53
CTDSPL2-209ENST00000560620 A0A087WZY1 265 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 IGLV3-32A0A0A0MS00 114 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 MBD3L4A6NDZ8 208 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 MBD3L3A6NE82 208 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 MBD3L5A6NJ08 208 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 SASH3O75995 380 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 PRF1P14222 555 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ME2P23368 584 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 CTSSP25774 331 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 UQCRC1P31930 480 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 CDKN2CP42773 168 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ANXA11P50995 505 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 POLR2JP52435 117 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 AQP5P55064 265 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 CLDN18P56856 261 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 RPS3AP61247 264 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF117Q03924 483 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 MYBPHQ13203 477 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 CD226Q15762 336 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 BCL2A1Q16548 175 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ARHGAP11BQ3KRB8 267 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 GLYR1Q49A26 553 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 KLHL26Q53HC5 615 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 C6orf10Q5SRN2 563 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 EPGNQ6UW88 154 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 OLIG3Q7RTU3 272 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 C9orf106Q8NAJ2 232 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 MBD3L2Q8NHZ7 208 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 PNPT1Q8TCS8 783 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 WNT2BQ93097 391 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 INTS12Q96CB8 462 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 NEURL3Q96EH8 262 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 SPOCK3Q9BQ16 436 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 INPP5KQ9BT40 448 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 PINK1Q9BXM7 581 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZIM2Q9NZV7 527 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 KIAA1549Q9HCM3 1950 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
CTDSPL2-209ENST00000560620 HCFC1P51610 2035 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 UQCRHLA0A096LP55 91 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 SLC22A20A6NK97 555 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 H0YC42 278 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 ZNF195O14628 629 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 FCMRO60667 390 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 TGDSO95455 350 aa11.71□□□□□ -0.53
CTDSPL2-209ENST00000560620 OPN1LWP04000 364 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms