RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 OR2W6PQ8NHA6 318 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 ABHD3Q8WU67 409 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 PROX1Q92786 737 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 MRRFQ96E11 262 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 RADILQ96JH8 1075 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 RNF145Q96MT1 663 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 SHCBP1LQ9BZQ2 653 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 VPS11Q9H270 941 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 CBLN4Q9NTU7 201 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 DDX18Q9NVP1 670 aaKnown RBP15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 KLHL13Q9P2N7 655 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 MALRD1Q5VYJ5 2156 aa15.82■□□□□ 0.12
TSPAN3-208ENST00000560514 A0A087WV62 115 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 ESYT3A0FGR9 886 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 SHISA9B4DS77 424 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 CSF3P09919 207 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 CTAGE8P0CG41 777 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 IGHV4-31P0DP07 118 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 USF1P22415 310 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 NCBP2P52298 156 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 LSM11P83369 360 aaKnown RBP eCLIP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 SQLEQ14534 574 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 GLE1Q53GS7 698 aaKnown RBP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 TCHHL1Q5QJ38 904 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 TMEM107Q6UX40 140 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 IL17RELQ6ZVW7 336 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 TDRPQ86YL5 185 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 CTAGE4Q8IX94 777 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 C17orf53Q8N3J3 647 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 RNF128Q8TEB7 428 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 CPNE4Q96A23 557 aaPredicted RBP15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 KLHL15Q96M94 604 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 L2HGDHQ9H9P8 463 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 NINJ2Q9NZG7 142 aa15.81■□□□□ 0.12
TSPAN3-208ENST00000560514 A0A1W2PRB8 838 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 PRKD3O94806 890 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 KRT6AP02538 564 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 KRT6BP04259 564 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 JUNP05412 331 aaKnown RBP15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 PGRP06401 933 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 INHBAP08476 426 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 BMP4P12644 408 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 HSD3B1P14060 373 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 IGFBP5P24593 272 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 HSD3B2P26439 372 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 TTKP33981 857 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 GABRA3P34903 492 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 SFTPDP35247 375 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 MAGEA12P43365 314 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 KRT6CP48668 564 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 ACSM2AQ08AH3 577 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 UAP1Q16222 522 aaPredicted RBP15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 ZNF239Q16600 458 aaKnown RBP15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 TSNAXIP1Q2TAA8 658 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 GRAMD1BQ3KR37 738 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 FAM120AOSQ5T036 256 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 ACSM2BQ68CK6 577 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 LETMD1Q6P1Q0 360 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 LILRA2Q8N149 483 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 GP6Q9HCN6 339 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 MED17Q9NVC6 651 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 DMGDHQ9UI17 866 aaKnown RBP15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 ZNF180Q9UJW8 692 aa15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 C19orf53Q9UNZ5 99 aaPredicted RBP15.8■□□□□ 0.12
TSPAN3-208ENST00000560514 C7orf72A4D263 438 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 URI1O94763 535 aaPredicted RBP15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 YES1P07947 543 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 HPGDP15428 266 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 PLPPR5Q32ZL2 321 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 SPIN4Q56A73 249 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 SLC22A25Q6T423 547 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 APOOLQ6UXV4 268 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 TRABD2AQ86V40 505 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 CNPY4Q8N129 248 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 DEPDC4Q8N2C3 294 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 MUC15Q8N387 334 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 GATSQ8NAP1 163 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 MNS1Q8NEH6 495 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 CDC26Q8NHZ8 85 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 C16orf78Q8WTQ4 265 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 HTRA1Q92743 480 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 DHRS9Q9BPW9 319 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 MGAT4BQ9UQ53 548 aa15.79■□□□□ 0.12
TSPAN3-208ENST00000560514 LOC100289279A0A1B0GTE1 492 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 TTC36A6NLP5 189 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 GJE1A6NN92 205 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 KIAA0513O60268 411 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 LYZL6O75951 148 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 TSPAN8P19075 237 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 NTSP30990 170 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 FABP6P51161 128 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 CDH13P55290 713 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 SLC18A2Q05940 514 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 SEZ6L2Q6UXD5 910 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 TMEM108Q6UXF1 575 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 Q6ZT83 130 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 RPS27LQ71UM5 84 aaKnown RBP15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 FCRLAQ7L513 359 aa15.78■□□□□ 0.12
TSPAN3-208ENST00000560514 ACTRT2Q8TDY3 377 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms