RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SLC2A7Q6PXP3 512 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 TRILQ7L0X0 811 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 SPPL2CQ8IUH8 684 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 FADS6Q8N9I5 356 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 WDSUB1Q8N9V3 476 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 OR4C3Q8NH37 302 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 XAGE5Q8WWM1 108 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 LRRC58Q96CX6 371 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 GID8Q9NWU2 228 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 ADA2Q9NZK5 511 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 SUCOQ9UBS9 1254 aaKnown RBP12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 WDR45Q9Y484 360 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 NINQ8N4C6 2090 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
PKNOX1-209ENST00000560448 ESPL1Q14674 2120 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 PRORSD1PA6NEY8 169 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 EVPLLA8MZ36 301 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 NPIPB9F8W1W9 429 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 NME4O00746 187 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 KIAA0513O60268 411 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 CDC40O60508 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 GSNP06396 782 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 HOXD4P09016 255 aaPredicted RBP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 ABOP16442 354 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC6A2P23975 617 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 PTGS2P35354 604 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 MVDP53602 400 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 CRISP3P54108 245 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SUMO3P55854 103 aaPredicted RBP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 PER3P56645 1201 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SF3B4Q15427 424 aaKnown RBP eCLIP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 RGNQ15493 299 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 ZNF141Q15928 474 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 ZSWIM7Q19AV6 140 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 ZNF630Q2M218 657 aaPredicted RBP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 KLHL26Q53HC5 615 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 CCNJQ5T5M9 372 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 DNAJC14Q6Y2X3 702 aaPredicted RBP12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 LRRC74BQ6ZQY2 392 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC15A3Q8IY34 581 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 CLEC4FQ8N1N0 589 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 RNF148Q8N7C7 305 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 TOR1AIP2Q8NFQ8 470 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 OR4K17Q8NGC6 315 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 GNRHR2Q96P88 292 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SH3GL1Q99961 368 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC39A3Q9BRY0 314 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 CMTM6Q9NX76 183 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 DTNAQ9Y4J8 743 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 POLEQ07864 2286 aa12.74□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A087WZY1 265 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 TRBV5-3A0A0A0MS03 114 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 H3BNX3 289 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 GNB5O14775 395 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SCO2O43819 266 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 ACTL6AO96019 429 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 RFPL3SP0C7P2 107 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 ANPEPP15144 967 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 GPX2P18283 190 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 PTGER4P35408 488 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 MSX2P35548 267 aaPredicted RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 CRATP43155 626 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 PTDSS1P48651 473 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC7A2P52569 658 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 DSTNP60981 165 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 TRAP1Q12931 704 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 TRIM25Q14258 630 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SPATS1Q496A3 300 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SAMD4BQ5PRF9 694 aaKnown RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 DLEU7Q6UYE1 221 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 CMIPQ8IY22 773 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 PM20D2Q8IYS1 436 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 ZNF619Q8N2I2 560 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 PRR7Q8TB68 274 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 FAM57AQ8TBR7 257 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 NRG4Q8WWG1 115 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 RELTQ969Z4 430 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 OTUB1Q96FW1 271 aaPredicted RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 TSPAN10Q9H1Z9 355 aaPredicted RBP12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 EXO5Q9H790 373 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 STOML1Q9UBI4 398 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 KCNE3Q9Y6H6 103 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 SVILO95425 2214 aa12.73□□□□□ -0.37
PKNOX1-209ENST00000560448 A0A1B0GTH9 108 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 FIGNL2A6NMB9 653 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 ADAM10O14672 748 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 NR2F1P10589 423 aa12.72□□□□□ -0.37
PKNOX1-209ENST00000560448 HSD17B1P14061 328 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms