RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 COL21A1Q96P44 957 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 BTBD9Q96Q07 612 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 NODALQ96S42 347 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 SH3GL1Q99961 368 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 RMND5AQ9H871 391 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 FARSBQ9NSD9 589 aaKnown RBP12.33□□□□□ -0.44
SMAD3-214ENST00000560402 VPS29Q9UBQ0 182 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 UTS2RQ9UKP6 389 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 PLEKHA6Q9Y2H5 1048 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 WIF1Q9Y5W5 379 aa12.33□□□□□ -0.44
SMAD3-214ENST00000560402 MED12LQ86YW9 2145 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 MED12Q93074 2177 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 UGT2B11O75310 529 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 G6PDP11413 515 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 DRD2P14416 443 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 KLK2P20151 261 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 SRD5A2P31213 254 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 KRT20P35900 424 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 EMDP50402 254 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 DGKQP52824 942 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 UFM1P61960 85 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 MRPS22P82650 360 aaKnown RBP12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ACSM2AQ08AH3 577 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 LTB4RQ15722 352 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 TIGD2Q4W5G0 525 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 SPIN4Q56A73 249 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ACSM2BQ68CK6 577 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 PLCZ1Q86YW0 608 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 MMP21Q8N119 569 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 C1orf52Q8N6N3 182 aaKnown RBP12.32□□□□□ -0.44
SMAD3-214ENST00000560402 C9orf106Q8NAJ2 232 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ADCY4Q8NFM4 1077 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 OR14L1PQ8NHC6 308 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 WNT2BQ93097 391 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 LRRC58Q96CX6 371 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ZNF681Q96N22 645 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 HBEGFQ99075 208 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 PIGMQ9H3S5 423 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 GALNT9Q9HCQ5 603 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 S100A14Q9HCY8 104 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 SERHLQ9NQF3 203 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 GIMAP4Q9NUV9 329 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 MRPS18CQ9Y3D5 142 aaKnown RBP12.32□□□□□ -0.44
SMAD3-214ENST00000560402 CCL27Q9Y4X3 112 aa12.32□□□□□ -0.44
SMAD3-214ENST00000560402 FLNAP21333 2647 aaKnown RBP12.32□□□□□ -0.44
SMAD3-214ENST00000560402 MAP1AP78559 2803 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 VPS13CQ709C8 3753 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 CLCA1A8K7I4 914 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 PCDH7O60245 1069 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 GMNNO75496 209 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 RCBTB2O95199 551 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 KCNH1O95259 989 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 ANP32DO95626 131 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 BAG2O95816 211 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 ANPEPP15144 967 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 FOSL1P15407 271 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 DDX5P17844 614 aaKnown RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 IL12BP29460 328 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 SOX18P35713 384 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 ASMTP46597 345 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 SLC7A2P52569 658 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 GFRA1P56159 465 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 EEFSECP57772 596 aaKnown RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 SESN3P58005 492 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 DUSP2Q05923 314 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 GAB1Q13480 694 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 TRIM25Q14258 630 aaKnown RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 RFTN2Q52LD8 501 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 TRMT12Q53H54 448 aaKnown RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 ZNF628Q5EBL2 1059 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 LRRC74BQ6ZQY2 392 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 MSANTD1Q6ZTZ1 278 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 DHDDSQ86SQ9 333 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 DPP10Q8N608 796 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 TMBIM1Q969X1 311 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 VSTM2LQ96N03 204 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 TUBA1CQ9BQE3 449 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 YIPF4Q9BSR8 244 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 LIME1Q9H400 295 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 EHD3Q9NZN3 535 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 C6orf203Q9P0P8 240 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 TMEM181Q9P2C4 612 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 CLCF1Q9UBD9 225 aa12.31□□□□□ -0.44
SMAD3-214ENST00000560402 GPR55Q9Y2T6 319 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-214ENST00000560402 HCRTR2O43614 444 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 COQ9O75208 318 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 REM1O75628 298 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 SLITRK5O94991 958 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 ATE1O95260 518 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 IL3P08700 152 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 HSD17B1P14061 328 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 PRPS1L1P21108 318 aa12.3□□□□□ -0.44
SMAD3-214ENST00000560402 RPL3P39023 403 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms