RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	CDRT1	O95170	752 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	LYPD3	O95274	346 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	IGKV1D-16	P01601	117 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	CCNYL3	P0C7X3	344 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	CLU	P10909	449 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	PIP	P12273	146 aa	Predicted RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ST6GAL1	P15907	406 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	NT5E	P21589	574 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	TBXA2R	P21731	343 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	SOX6	P35712	828 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ARPC4	P59998	168 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	RPS15A	P62244	130 aa	Known RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	EEF1A1	P68104	462 aa	Known RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	MAT1A	Q00266	395 aa	Known RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	TEK	Q02763	1124 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	FAM53B	Q14153	422 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZNF79	Q15937	498 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	OCLN	Q16625	522 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	PAMR1	Q6UXH9	720 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	THSD4	Q6ZMP0	1018 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	PLEKHM3	Q6ZWE6	761 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	USP30	Q70CQ3	517 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	RAB43	Q86YS6	212 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	OR2L13	Q8N349	312 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	NATD1	Q8N6N6	113 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ANKK1	Q8NFD2	765 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	NT5C	Q8TCD5	201 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	UBASH3B	Q8TF42	649 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	SLC41A3	Q96GZ6	507 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ART5	Q96L15	291 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	PTCHD1	Q96NR3	888 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	NELL2	Q99435	816 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	TBX5	Q99593	518 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZNF649	Q9BS31	505 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	DPH1	Q9BZG8	443 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	TPSD1	Q9BZJ3	242 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	IRF2BPL	Q9H1B7	796 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ISG20L2	Q9H9L3	353 aa	Known RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	IL21R	Q9HBE5	538 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	C3orf14	Q9HBI5	128 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	SMURF1	Q9HCE7	757 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	HRASLS2	Q9NWW9	162 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZSCAN32	Q9NX65	697 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	CPNE7	Q9UBL6	633 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	PCOLCE2	Q9UKZ9	415 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	WDR45	Q9Y484	360 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	KLK4	Q9Y5K2	254 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	SLC22A7	Q9Y694	548 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369		V9GYH0	126 aa		5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369	MN1	Q10571	1320 aa	Predicted RBP	5.36	□□□□□ -1.55
LRRC49-223	ENST00000560369		A0A0G2JMP0	313 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369		A0A0X1KG70	313 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	IMPA2	O14732	288 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GNB5	O14775	395 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MAGEB4	O15481	346 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	KLF4	O43474	513 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TNFSF14	O43557	240 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CPNE3	O75131	537 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SLC35G6	P0C7Q6	338 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	IL7	P13232	177 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MAOB	P27338	520 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	EMD	P50402	254 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MAZ	P56270	477 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SNRPD2	P62316	118 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	GPLD1	P80108	840 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	FABP5	Q01469	135 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RHAG	Q02094	409 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RGS1	Q08116	209 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ZNF155	Q12901	538 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	NCF4	Q15080	339 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	FBXO43	Q4G163	708 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MRPL2	Q5T653	305 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	VASN	Q6EMK4	673 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SMARCD3	Q6STE5	483 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CD300LD	Q6UXZ3	194 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TMEM151B	Q8IW70	566 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SLC44A3	Q8N4M1	653 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SIRT6	Q8N6T7	355 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	DTX3	Q8N9I9	347 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	AVL9	Q8NBF6	648 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TMEM163	Q8TC26	289 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RASSF5	Q8WWW0	418 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	ANKRD9	Q96BM1	317 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	RNF170	Q96K19	258 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MSLNL	Q96KJ4	702 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	SNX18	Q96RF0	628 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	LMF1	Q96S06	567 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	CDCA3	Q99618	268 aa	Predicted RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	KLHDC3	Q9BQ90	382 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	C1QTNF7	Q9BXJ2	289 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TTTY10	Q9BZA0	68 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TWSG1	Q9GZX9	223 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	LMAN2L	Q9H0V9	348 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MIXL1	Q9H2W2	232 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TRPV5	Q9NQA5	729 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	HINT3	Q9NQE9	182 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	TXNL4B	Q9NX01	149 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	USP36	Q9P275	1121 aa	Known RBP	5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	MSRA	Q9UJ68	235 aa		5.35	□□□□□ -1.55
LRRC49-223	ENST00000560369	NCKAP1	Q9Y2A7	1128 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms