RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 HAS1Q92839 578 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 SRRQ9GZT4 340 aa13.13□□□□□ -0.31
CSPG4P12-202ENST00000559989 hCG_1809904A0A1W2PP81 198 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 A0A1W2PPE2 198 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 A0A1W2PR64 198 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 A0A1W2PRV1 198 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 EEDO75530 441 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PKDCCQ504Y2 493 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 FKBP1CQ5VVH2 108 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 RNLSQ5VYX0 342 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 THAP3Q8WTV1 239 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PSMF1Q92530 271 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 RBM24Q9BX46 236 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SOX17Q9H6I2 414 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 UGT2A1Q9Y4X1 527 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 FUOMA2VDF0 154 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 KLHL33A6NCF5 533 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ADM5C9JUS6 153 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 CDC123O75794 336 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 GALTP07902 379 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 GDI1P31150 447 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR8U1Q8NH10 309 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 CORO2AQ92828 525 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 TRAPPC2LH3BP13 241 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 FABP1P07148 127 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 RAP2BP61225 183 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 CATR1Q13166 79 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR14L1PQ8NHC6 308 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SH3RF2Q8TEC5 729 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 GAREM1Q9H706 876 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ACKR4Q9NPB9 350 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 EHFQ9NZC4 300 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC16A5O15375 505 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 DUX1O43812 170 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 UBL4AP11441 157 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 GLB1P16278 677 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 GABRA2P47869 451 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 MPEG1Q2M385 716 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 BABAM2Q9NXR7 383 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 NPIPA5A0A0B4J1W7 369 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRAMEF27A3QJZ7 478 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 KLF11O14901 512 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 KIAA0355O15063 1070 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 KLRC4O43908 158 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 THBS1P07996 1170 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 MYF6P23409 242 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 WNT4P56705 351 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 HSF1Q00613 529 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 TNK1Q13470 666 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRAMEF9Q5VWM5 478 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 MUL1Q969V5 352 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 OR2M2Q96R28 347 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ARV1Q9H2C2 271 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC22A11Q9NSA0 550 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 MTCH1Q9NZJ7 389 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 COQ4Q9Y3A0 265 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 FBXO24O75426 580 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 APBB3O95704 486 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 TXNDC12O95881 172 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 BMP4P12644 408 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SYN1P17600 705 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 HADHBP55084 474 aaKnown RBP13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ANGPTL6Q8NI99 470 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 AMDHD1Q96NU7 426 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 DPEP3Q9H4B8 488 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
CSPG4P12-202ENST00000559989 ANKRD66B4E2M5 251 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ASGR2P07307 311 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC6A8P48029 635 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 CRMP1Q14194 572 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 SLC15A4Q8N697 577 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 RDH14Q9HBH5 336 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 NOX3Q9HBY0 568 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 TLR9Q9NR96 1032 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 FBXL4Q9UKA2 621 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 DTYMKP23919 212 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 NLGN4XQ8N0W4 816 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 ZNF382Q96SR6 550 aa13.11□□□□□ -0.31
CSPG4P12-202ENST00000559989 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms