RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ETV2O00321 342 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 SNPHO15079 494 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 HS6ST1O60243 411 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 BCAS1O75363 584 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 ANGPTL1O95841 491 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 CD46P15529 392 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 PRKAR1BP31321 381 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 KCNJ5P48544 419 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 DLX5P56178 289 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 HPCAP84074 193 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 MS4A2Q01362 244 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 DMTNQ08495 405 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 BNIP2Q12982 314 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 TRIM25Q14258 630 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF169Q14929 603 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 INAQ16352 499 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 ZSWIM7Q19AV6 140 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 SLC6A19Q695T7 634 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 COMTD1Q86VU5 262 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 MISPQ8IVT2 679 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 SULF2Q8IWU5 870 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF527Q8NB42 609 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 TMEM178AQ8NBL3 297 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 TNIP2Q8NFZ5 429 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 CLPTM1LQ96KA5 538 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 BARD1Q99728 777 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 FAM173AQ9BQD7 235 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 MUC13Q9H3R2 512 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 GALNT9Q9HCQ5 603 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 EXOSC3Q9NQT5 275 aaKnown RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 OLAHQ9NV23 265 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 ACTR3BQ9P1U1 418 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 PRDM4Q9UKN5 801 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 KLF13Q9Y2Y9 288 aaPredicted RBP13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 IFT52Q9Y366 437 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.25
SNRPA1-207ENST00000559309 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 C17orf51A8MQB3 221 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 C5orf58C9J3I9 102 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SYT5O00445 386 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 CXCR6O00574 342 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SCDO00767 359 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 OIP5O43482 229 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 PEX1O43933 1283 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ADAM11O75078 769 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 PDE9AO76083 593 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 P04436 131 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 C8BP07358 591 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ENDOUP21128 410 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ME2P23368 584 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 RFX3P48380 749 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 KCNJ10P78508 379 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SKP2Q13309 424 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 DUSP7Q16829 419 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 PLEKHN1Q494U1 663 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 PRAMEF20Q5VT98 475 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 LCN8Q6JVE9 175 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF836Q6ZNA1 936 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 GALNTL5Q7Z4T8 443 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF605Q86T29 641 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 MARCH3Q86UD3 253 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 IFNEQ86WN2 208 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 VRK2Q86Y07 508 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ULK2Q8IYT8 1036 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 TOR1AIP2Q8NFQ8 470 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 GPR32P1Q8NGA4 272 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 OR52P1PQ8NH57 321 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ASB9Q96DX5 294 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ARSGQ96EG1 525 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF607Q96SK3 696 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 DNAJB12Q9NXW2 375 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SLC7A8Q9UHI5 535 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 MAGEL2Q9UJ55 1249 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ICAM5Q9UMF0 924 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SLC35A3Q9Y2D2 325 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 NINQ8N4C6 2090 aa13.51□□□□□ -0.25
SNRPA1-207ENST00000559309 CLDN24A6NM45 220 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 FAAHO00519 579 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ARPC2O15144 300 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 TPST1O60507 370 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 EIF4E2O60573 245 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 DNASE1L1P49184 302 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF117Q03924 483 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 C17orf67Q0P5P2 114 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 TRAP1Q12931 704 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 INPP5JQ15735 1006 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ZSCAN26Q16670 478 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 NADK2Q4G0N4 442 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 LIN52Q52LA3 116 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 ZNF324BQ6AW86 544 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 TIGD3Q6B0B8 471 aa13.5□□□□□ -0.25
SNRPA1-207ENST00000559309 GLYATQ6IB77 296 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms