RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MEX3DQ86XN8 651 aaKnown RBP11.96□□□□□ -0.49
SMAD3-207ENST00000558763 KIF18BQ86Y91 864 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 BMPERQ8N8U9 685 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 POGLUT1Q8NBL1 392 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 SLC38A9Q8NBW4 561 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 PMEPA1Q969W9 287 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 FKBP10Q96AY3 582 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 NODALQ96S42 347 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 TRIM45Q9H8W5 580 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF304Q9HCX3 659 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 AKAP7Q9P0M2 348 aaPredicted RBP11.96□□□□□ -0.49
SMAD3-207ENST00000558763 ERVK-18Q9QC07 812 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 CDC14AQ9UNH5 594 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 ZNF232Q9UNY5 417 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
SMAD3-207ENST00000558763 DDAH2O95865 285 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 CCNYL3P0C7X3 344 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 GKN3PP0CG01 181 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 CDK4P11802 303 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 FBLP22087 321 aaKnown RBP11.96□□□□□ -0.5
SMAD3-207ENST00000558763 ACVR2AP27037 513 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 PCSK6P29122 969 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 SLC37A1P57057 533 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 ST3GAL3Q11203 375 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 BIKQ13323 160 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 NNATQ16517 81 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 FLYWCH1Q4VC44 716 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 PDZK1Q5T2W1 519 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 C1orf189Q5VU69 101 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 RHBDD2Q6NTF9 364 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 PLEKHM3Q6ZWE6 761 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 RAB11FIP2Q7L804 512 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 PPP1R3BQ86XI6 285 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 MARCH9Q86YJ5 346 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 LINC00471Q8N535 108 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 MUL1Q969V5 352 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.5
SMAD3-207ENST00000558763 ARSGQ96EG1 525 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 SLC41A3Q96GZ6 507 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 SENP5Q96HI0 755 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-207ENST00000558763 LMF1Q96S06 567 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 MYCBPQ99417 103 aaPredicted RBP11.96□□□□□ -0.5
SMAD3-207ENST00000558763 DOK1Q99704 481 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 TUBA1CQ9BQE3 449 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 LHPPQ9H008 270 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 POLR2J3Q9H1A7 115 aaKnown RBP11.96□□□□□ -0.5
SMAD3-207ENST00000558763 CTSFQ9UBX1 484 aa11.96□□□□□ -0.5
SMAD3-207ENST00000558763 DCDC2BA2VCK2 349 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 AP3D1O14617 1153 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 POLR1CO15160 346 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 MT-ND2P03891 347 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 IFNA16P05015 189 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 DRD5P21918 477 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 DCKP27707 260 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 RORAP35398 523 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 EMX1Q04741 257 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF141Q15928 474 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 DECR1Q16698 335 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 PWWP2BQ6NUJ5 590 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 GRAMD2AQ8IUY3 354 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF721Q8TF20 911 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 FAR1Q8WVX9 515 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 ACOT11Q8WXI4 607 aaPredicted RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 CNOT9Q92600 299 aaKnown RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 FGF11Q92914 225 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 SLC38A4Q969I6 547 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 PLA2G12AQ9BZM1 189 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 SLC7A5P2Q9GIP4 190 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 VN1R1Q9GZP7 353 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 RSL24D1Q9UHA3 163 aaKnown RBP11.95□□□□□ -0.5
SMAD3-207ENST00000558763 PSORS1C1Q9UIG5 152 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 TPRKBQ9Y3C4 175 aa11.95□□□□□ -0.5
SMAD3-207ENST00000558763 IGLV3-12A0A075B6K2 115 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 TMX2-CTNND1H3BSU7 103 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PRKNO60260 465 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 FMO6PO60774 539 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 SCRG1O75711 98 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ETV5P41161 510 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 GP2P55259 537 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 FOXL2P58012 376 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 COX10Q12887 443 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 MINDY4Q4G0A6 757 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 C3orf38Q5JPI3 329 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ARHGAP40Q5TG30 622 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PRICKLE2Q7Z3G6 844 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 BCORP1Q8N888 145 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 TMEM255BQ8WV15 326 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ISOC1Q96CN7 298 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 LIN37Q96GY3 246 aaPredicted RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 NAA50Q9GZZ1 169 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 DNAJB12Q9NXW2 375 aaKnown RBP11.94□□□□□ -0.5
SMAD3-207ENST00000558763 SLC39A1Q9NY26 324 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 PISDQ9UG56 409 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 TRIM64BA6NI03 449 aa11.94□□□□□ -0.5
SMAD3-207ENST00000558763 ZNF701M0R085 212 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms