RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SLC35A4Q96G79 324 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 TRNT1Q96Q11 434 aaKnown RBP12.43□□□□□ -0.42
TMED3-205ENST00000558562 OR1F2PQ96R84 312 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 SPATA5L1Q9BVQ7 753 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 BTBD2Q9BX70 525 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 ALOXE3Q9BYJ1 711 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 REEP1Q9H902 201 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 ZNF160Q9HCG1 818 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 SEC14L3Q9UDX4 400 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 MMACHCQ9Y4U1 282 aa12.43□□□□□ -0.42
TMED3-205ENST00000558562 WISP2O76076 250 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 H6PDO95479 791 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 IFNW1P05000 195 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ALOX5P09917 674 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ITGA2P17301 1181 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 MAOAP21397 527 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SSTR2P30874 369 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 DNAJA1P31689 397 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 STT3AP46977 705 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 OR1E2P47887 323 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 KCNJ5P48544 419 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 TNFSF10P50591 281 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 BTG2P78543 158 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ADORA2A-AS1P86434 159 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 MAP4K2Q12851 820 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 PPP1R8Q12972 351 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 SERTAD2Q14140 314 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 DUSP5Q16690 384 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 CYP27C1Q4G0S4 372 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 IQCCQ4KMZ1 466 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 HEPHL1Q6MZM0 1159 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ZCCHC12Q6PEW1 402 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SHQ1Q6PI26 577 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 DGAT2L6Q6ZPD8 337 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 OLIG3Q7RTU3 272 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 TMEM179BQ7Z7N9 219 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 PRSS58Q8IYP2 241 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 HS3ST5Q8IZT8 346 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 MARVELD2Q8N4S9 558 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SLC16A11Q8NCK7 471 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SIMC1Q8NDZ2 872 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 GPR32P1Q8NGA4 272 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 OR52R1Q8NGF1 315 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 MAGEE2Q8TD90 523 aaPredicted RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 CDS1Q92903 461 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 C8orf44Q96CB5 159 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 CTHRC1Q96CG8 243 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ZNF300Q96RE9 604 aaPredicted RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 NR1H4Q96RI1 486 aaPredicted RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 RBM4BQ9BQ04 359 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 RBM4Q9BWF3 364 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 GABARAPL1Q9H0R8 117 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 WDR54Q9H977 334 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 CXorf21Q9HAI6 301 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SMPD3Q9NY59 655 aaPredicted RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 USE1Q9NZ43 259 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 SAMHD1Q9Y3Z3 626 aaKnown RBP12.42□□□□□ -0.42
TMED3-205ENST00000558562 ENPP4Q9Y6X5 453 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 U3KQV3 271 aa12.42□□□□□ -0.42
TMED3-205ENST00000558562 DLGAP1O14490 977 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 ADAMDEC1O15204 470 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 CBX7O95931 251 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 ALBP02768 609 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 FESP07332 822 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 THRBP10828 461 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 ARHGDIAP52565 204 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 SPIBQ01892 262 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 BIKQ13323 160 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 PDK3Q15120 406 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 DUSP7Q16829 419 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 MFSD4BQ5TF39 518 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 MTFR2Q6P444 385 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 XKRXQ6PP77 449 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 TSEN54Q7Z6J9 526 aaKnown RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 SIRT6Q8N6T7 355 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 COX18Q8N8Q8 333 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 RIT1Q92963 219 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 NRBF2Q96F24 287 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 RBM18Q96H35 190 aaKnown RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 ZNF354BQ96LW1 612 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 CNBD2Q96M20 576 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 STACQ99469 402 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 ADI1Q9BV57 179 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 SLC26A1Q9H2B4 701 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 SLC38A1Q9H2H9 487 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 PIGUQ9H490 435 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 TRIM45Q9H8W5 580 aaPredicted RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 NECTIN3Q9NQS3 549 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 LANCL2Q9NS86 450 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 NDUFAF4Q9P032 175 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 SH3GLB1Q9Y371 365 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 FAM32AQ9Y421 112 aaKnown RBP12.41□□□□□ -0.42
TMED3-205ENST00000558562 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
TMED3-205ENST00000558562 CLDN16Q9Y5I7 305 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms