RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RBBP8Q99708 897 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 PIMREGQ9BSJ6 248 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 ELOVL6Q9H5J4 265 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NOL11Q9H8H0 719 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 C3orf14Q9HBI5 128 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 EML4Q9HC35 981 aaKnown RBP4.59□□□□□ -1.67
SPG11-208ENST00000558155 Q9N2J8 555 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SENP1Q9P0U3 644 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 NFU1Q9UMS0 254 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 SLC12A4Q9UP95 1085 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 VDAC3Q9Y277 283 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 JRKLQ9Y4A0 524 aa4.59□□□□□ -1.67
SPG11-208ENST00000558155 A0A0J9YW62 118 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GOLGA8QA0A0J9YX86 632 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 LOC390937A0A1W2PQ73 354 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ESYT3A0FGR9 886 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GOLGA8OA6NCC3 632 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GJE1A6NN92 205 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 CXorf49A8MYA2 514 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 VWC2LB2RUY7 222 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ZNF814B7Z6K7 855 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 SHISA8B8ZZ34 492 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GOLGA8NF8WBI6 632 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GOLGA8RI6L899 631 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GMFGO60234 142 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 PLOD3O60568 738 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 LILRA1O75019 489 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 COQ9O75208 318 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 NME6O75414 186 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 PGM3O95394 542 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 UTS2O95399 124 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 NTN1O95631 604 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 IL33O95760 270 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ANGPTL1O95841 491 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 DHRS4L1P0CG22 281 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 MTHFD2P13995 350 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 CREB1P16220 341 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ITGA2P17301 1181 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GGT1P19440 569 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 PTAFRP25105 342 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 APOBEC3AP31941 199 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 EIF1P41567 113 aaKnown RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 NR4A2P43354 598 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 RFX3P48380 749 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ZNF41P51814 821 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 PRR5P85299 388 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 PSG6Q00889 435 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 DUSP2Q05923 314 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 DLG1Q12959 904 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 HEPACAMQ14CZ8 416 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FAM174BQ3ZCQ3 159 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ARL13AQ5H913 290 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 ZNF544Q6NX49 715 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FAM180BQ6P0A1 224 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 UGT2A3Q6UWM9 527 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FCRLAQ7L513 359 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 COMMD6Q7Z4G1 85 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ATG4DQ86TL0 474 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 TRABD2AQ86V40 505 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 CTAGE3PQ8IX95 158 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ZBED8Q8IZ13 594 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FAM9CQ8IZT9 166 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 LILRA2Q8N149 483 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 SLC43A2Q8N370 569 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 MMGT1Q8N4V1 131 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 OR9A2Q8NGT5 310 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FAM110BQ8TC76 370 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ACTRT2Q8TDY3 377 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 RNF128Q8TEB7 428 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 KCTD4Q8WVF5 259 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 HTRA1Q92743 480 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 GCDHQ92947 438 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 CPNE4Q96A23 557 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 EXOSC8Q96B26 276 aaKnown RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 C3orf49Q96BT1 292 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ZNF837Q96EG3 531 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 C1orf159Q96HA4 380 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 KLHL15Q96M94 604 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FOXN4Q96NZ1 517 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 BBS4Q96RK4 519 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 SHCBP1LQ9BZQ2 653 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 RTN4RQ9BZR6 473 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 ANKRA2Q9H9E1 313 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FKRPQ9H9S5 495 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 MYOZ1Q9NP98 299 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 SLC35C2Q9NQQ7 365 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 FLRT3Q9NZU0 649 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 CPSF2Q9P2I0 782 aaKnown RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 KLHL13Q9P2N7 655 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 TMEFF2Q9UIK5 374 aaPredicted RBP4.58□□□□□ -1.68
SPG11-208ENST00000558155 FKBP7Q9Y680 259 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 CUBNO60494 3623 aa4.58□□□□□ -1.68
SPG11-208ENST00000558155 A0A087WV62 115 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 A0A1W2PRB8 838 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 CIB4A0PJX0 185 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 C7orf72A4D263 438 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 OR5H1A6NKK0 313 aa4.57□□□□□ -1.68
SPG11-208ENST00000558155 E7ESA3 106 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms