RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 DNAJC15Q9Y5T4 150 aa12.22□□□□□ -0.45
SNRPA1-204ENST00000558020 A0A1W2PQD3 144 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 GJE1A6NN92 205 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 LSM1O15116 133 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 NPHS1O60500 1241 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 AQP8O94778 261 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 KRT16P08779 473 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 BCKDHAP12694 445 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 CARD18P57730 90 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 POU6F2P78424 691 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 GUSBP1Q15486 140 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 DUSP5Q16690 384 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 LSM12Q3MHD2 195 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 KANK2Q63ZY3 851 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 PRSS57Q6UWY2 283 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 MTERF4Q7Z6M4 381 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 GGNQ86UU5 652 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 CXorf67Q86X51 503 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 GSPT2Q8IYD1 628 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 OR2T11Q8NH01 316 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 CLHC1Q8NHS4 586 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 B4GALNT2Q8NHY0 566 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 EPS8L3Q8TE67 593 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 STACQ99469 402 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 CCL19Q99731 98 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 BDH2Q9BUT1 245 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 C12orf65Q9H3J6 166 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 UBTD1Q9HAC8 227 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 ZCCHC3Q9NUD5 404 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 GIN1Q9NXP7 522 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 SNX8Q9Y5X2 465 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 PTGDR2Q9Y5Y4 395 aa12.21□□□□□ -0.45
SNRPA1-204ENST00000558020 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.46
SNRPA1-204ENST00000558020 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 A0A1W2PPR1 153 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 A0A1W2PRB8 838 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 SS18L1O75177 396 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 LYPLA1O75608 230 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 NUDT14O95848 222 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ACP2P11117 423 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 SERPINB5P36952 375 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 NR1H2P55055 460 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 TP53BP2Q13625 1128 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 PCLAFQ15004 111 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 PLPPR5Q32ZL2 321 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ATP6AP1LQ52LC2 224 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ARL13AQ5H913 290 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 BEX5Q5H9J7 111 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ANKRD34AQ69YU3 496 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 BHLHB9Q6PI77 547 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 PLEKHM3Q6ZWE6 761 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ZNF550Q7Z398 422 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 GALNT10Q86SR1 603 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 TRABD2AQ86V40 505 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 LILRA2Q8N149 483 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 RIBC1Q8N443 379 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 GATSQ8NAP1 163 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 OR2V1Q8NHB1 315 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 TWIST2Q8WVJ9 160 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 OSTF1Q92882 214 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ARL8AQ96BM9 186 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 GIMAP5Q96F15 307 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 C16orf58Q96GQ5 468 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 SH3YL1Q96HL8 342 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 RNF145Q96MT1 663 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 HDHD5Q9BXW7 423 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 PIGUQ9H490 435 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 TUBB1Q9H4B7 451 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ATP6V1HQ9UI12 483 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 PCNX3Q9H6A9 2034 aa12.2□□□□□ -0.46
SNRPA1-204ENST00000558020 ZNF469Q96JG9 3925 aaPredicted RBP12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 SHISA8B8ZZ34 492 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 GTPBP1O00178 669 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 CXCL13O43927 109 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 TUBBP07437 444 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 ADH6P28332 368 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 SLC6A8P48029 635 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 CCT3P49368 545 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 LTBQ06643 244 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 IFFO1Q0D2I5 559 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 ZNF385BQ569K4 471 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 Q5PR19 223 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 BANPQ8N9N5 519 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 OR56A1Q8NGH5 318 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 FBXO30Q8TB52 745 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 PHOSPHO1Q8TCT1 267 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 ADAMTS15Q8TE58 950 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 OR5P2Q8WZ92 322 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 MOAP1Q96BY2 351 aa12.19□□□□□ -0.46
SNRPA1-204ENST00000558020 FAM120BQ96EK7 910 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms