RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LYPD3O95274 346 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ONECUT2O95948 504 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 AK1P00568 194 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 IGKV3-11P04433 115 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ZNF883P0CG24 379 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ANXA8P13928 327 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ATP6V1B1P15313 513 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 IL7RP16871 459 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 TNNI3P19429 210 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 AGXTP21549 392 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 RYKP34925 604 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 RORAP35398 523 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 DUSP3P51452 185 aaPredicted RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 ZNF136P52737 540 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 SLC37A1P57057 533 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 RPP38P78345 283 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 HPCAP84074 193 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 NPRL3Q12980 569 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 BIKQ13323 160 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 DGCR6Q14129 220 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 CLPPQ16740 277 aaPredicted RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 MEP1AQ16819 746 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 MINDY4Q4G0A6 757 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 FGD3Q5JSP0 725 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 C6orf141Q5SZD1 244 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 LCN10Q6JVE6 187 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PWWP2BQ6NUJ5 590 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PGBD2Q6P3X8 592 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 TTC33Q6PID6 262 aaPredicted RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 ZER1Q7Z7L7 766 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PEX5LQ8IYB4 626 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 C8orf59Q8N0T1 100 aaPredicted RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 NLGN4XQ8N0W4 816 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 BMPERQ8N8U9 685 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 MORN4Q8NDC4 146 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 AGBL5Q8NDL9 886 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PLPP5Q8NEB5 264 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 TSPAN14Q8NG11 270 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 OR7G1Q8NGA0 311 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 SLC7A13Q8TCU3 470 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ZNF721Q8TF20 911 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 SGCDQ92629 289 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 DIO2Q92813 273 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 UBE2FQ969M7 185 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PRRC1Q96M27 445 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ZNF578Q96N58 590 aaPredicted RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 GFM1Q96RP9 751 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 LMF1Q96S06 567 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 GPA33Q99795 319 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PELOQ9BRX2 385 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 YTHDF1Q9BYJ9 559 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 POLE3Q9NRF9 147 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PAPOLBQ9NRJ5 636 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 PNO1Q9NRX1 252 aaKnown RBP6.81□□□□□ -1.32
SPG11-204ENST00000557866 SEMA4GQ9NTN9 838 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 KIF17Q9P2E2 1029 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 REV1Q9UBZ9 1251 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 RARRES3Q9UL19 164 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 SRPK3Q9UPE1 567 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PCDHGB2Q9Y5G2 931 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PCDHGA6Q9Y5G7 932 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 PCDHGA5Q9Y5G8 931 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 ORC6Q9Y5N6 252 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 RP1P56715 2156 aa6.81□□□□□ -1.32
SPG11-204ENST00000557866 A0A087WUU8 490 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 LNP1A1A4G5 178 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CDHR4A6H8M9 788 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 VSTM2BA6NLU5 285 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CPSF4LA6NMK7 179 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 EFCAB7A8K855 629 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CDX4O14627 284 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 CNOT3O75175 753 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 SCRG1O75711 98 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CYP7B1O75881 506 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 LDOC1O95751 146 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 TP53P04637 393 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 DBIP07108 87 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 IGFBP1P08833 259 aaPredicted RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 GKN3PP0CG01 181 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 PRG2P13727 222 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 POU2F1P14859 743 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 ZNF28P17035 718 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 NME2P22392 152 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 ACP1P24666 158 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 HTR2AP28223 471 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 GRK6P43250 576 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 ALDH3B2P48448 385 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 SMIM11AP58511 58 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 CDK5R2Q13319 367 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 IL18R1Q13478 541 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 KEAP1Q14145 624 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 LARS2Q15031 903 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 NNATQ16517 81 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 NKAIN1Q4KMZ8 207 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 LIN52Q52LA3 116 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 DCST1Q5T197 706 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 MRPL2Q5T653 305 aaKnown RBP6.8□□□□□ -1.32
SPG11-204ENST00000557866 MFSD4BQ5TF39 518 aa6.8□□□□□ -1.32
SPG11-204ENST00000557866 RNF220Q5VTB9 566 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms