RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 AP3B1O00203 1094 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 FRS3O43559 492 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 FADS1O60427 444 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 MPZL1O95297 269 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 IGHV3-9P01782 118 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 FAM58BPP0C7Q3 252 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CT45A8P0DMV1 189 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CT45A9P0DMV2 189 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 ME2P23368 584 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 SFTPDP35247 375 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 GGT5P36269 586 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 FEN1P39748 380 aaKnown RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 HNMTP50135 292 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 RAG2P55895 527 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 RAB10P61026 200 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 RAC1P63000 192 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 DDX39BQ13838 428 aaKnown RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 TRMT12Q53H54 448 aaKnown RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CT45A2Q5DJT8 189 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 PAGE2BQ5JRK9 111 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 DCAF12L2Q5VW00 463 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 SAXO2Q658L1 398 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CYP20A1Q6UW02 462 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 MARCH3Q86UD3 253 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 BCL6BQ8N143 479 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 GTPBP8Q8N3Z3 284 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 OR4N2Q8NGD1 307 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 OR4K14Q8NGD5 310 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 GTF3AQ92664 365 aaKnown RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CPNE4Q96A23 557 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 IQCDQ96DY2 449 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 WDR34Q96EX3 536 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CMTM7Q96FZ5 175 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 SERPINB12Q96P63 405 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CHP1Q99653 195 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 TMEM79Q9BSE2 394 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 GATA5Q9BWX5 397 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 CAPS2Q9BXY5 557 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 SDHAF3Q9NRP4 125 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 C20orf96Q9NUD7 363 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF69Q9UC07 566 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF639Q9UID6 485 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 TFR2Q9UP52 801 aa8.13□□□□□ -1.11
NEDD1-211ENST00000557454 HEATR1Q9H583 2144 aaKnown RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 TCRBV7S3A2A0A539 114 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 NCF1BA6NI72 391 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 NCF1CA8MVU1 366 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PLPP2O43688 288 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 LIASO43766 372 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 GBAP04062 536 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 IGFBP1P08833 259 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 MTHFD2P13995 350 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 NCF1P14598 390 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PCSK2P16519 638 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 SELEP16581 610 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ENPP1P22413 925 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PSMA4P25789 261 aaKnown RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PNLIPRP2P54317 469 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 MRPS22P82650 360 aaKnown RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 MRPS35P82673 323 aaKnown RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 CDKL1Q00532 357 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 MYBPC1Q00872 1141 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 LTB4RQ15722 352 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ADRM1Q16186 407 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 HIST2H2ACQ16777 129 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF311Q5JNZ3 666 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 HIST2H2AA3Q6FI13 130 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ACSM5Q6NUN0 579 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 SYT10Q6XYQ8 523 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF100Q8IYN0 542 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 WDR31Q8NA23 367 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 OR4F5Q8NH21 305 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ZNF300Q96RE9 604 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PSD2Q9BQI7 771 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 CENPKQ9BS16 269 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 TSGA10Q9BZW7 698 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 TPK1Q9H3S4 243 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 C7orf69Q9H7B7 122 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 NHEJ1Q9H9Q4 299 aaPredicted RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 BCO1Q9HAY6 547 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PLAC1Q9HBJ0 212 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 DYNLRB1Q9NP97 96 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 SAYSD1Q9NPB0 183 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 TESQ9UGI8 421 aaKnown RBP8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ICAM5Q9UMF0 924 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 ABCG2Q9UNQ0 655 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 OARD1Q9Y530 152 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 PCNX3Q9H6A9 2034 aa8.12□□□□□ -1.11
NEDD1-211ENST00000557454 SH3PXD2BA1X283 911 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 KLF11O14901 512 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 EPORP19235 508 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 GABRB3P28472 473 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 BSGP35613 385 aa8.11□□□□□ -1.11
NEDD1-211ENST00000557454 SLC1A3P43003 542 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms