RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ROR1Q01973 937 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 MAP2K1Q02750 393 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 SCARB2Q14108 478 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 KIAA0040Q15053 153 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 XKR4Q5GH76 650 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 C1orf220Q5T0J3 134 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ZNF776Q68DI1 518 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 TMEM182Q6ZP80 229 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 GLRX5Q86SX6 157 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 VPS36Q86VN1 386 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD46Q86W74 232 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ZNF677Q86XU0 584 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 CACUL1Q86Y37 369 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 WDR49Q8IV35 697 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 RNF10Q8N5U6 811 aaKnown RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 RNF149Q8NC42 400 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 FBXL13Q8NEE6 735 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 TRPV1Q8NER1 839 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 GOT1L1Q8NHS2 421 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 SAP25Q8TEE9 199 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 SHC3Q92529 594 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 ST6GALNAC6Q969X2 333 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 MTG1Q9BT17 334 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 GCOM2Q9BZD3 368 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 TSGA10Q9BZW7 698 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 TMEM117Q9H0C3 514 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 AMBNQ9NP70 447 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 AGPAT5Q9NUQ2 364 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 RCOR3Q9P2K3 495 aaPredicted RBP2.76□□□□□ -1.97
VRK1-207ENST00000557352 PYCARDQ9ULZ3 195 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 RNF24Q9Y225 148 aa2.76□□□□□ -1.97
VRK1-207ENST00000557352 PDE4DIPQ5VU43 2346 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 DOCK6Q96HP0 2047 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 OOEPA6NGQ2 149 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CCT8L1PA6NM43 557 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 KBTBD13C9JR72 458 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD63C9JTQ0 380 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CRCPO75575 148 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 RAD51DO75771 328 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ASS1P00966 412 aaKnown RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 PDGFBP01127 241 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 IGKV3-11P04433 115 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CCDC159P0C7I6 412 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 IQCF3P0C7M6 154 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 GZMAP12544 262 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 KCNE1P15382 129 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 FOSL2P15408 326 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CD1EP15812 388 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ARF4P18085 180 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 CYP2B6P20813 491 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CYP3A5P20815 502 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CRYBB1P53674 252 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 POLR2FP61218 127 aaKnown RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 SP4Q02446 784 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 PAX2Q02962 417 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 NCBP1Q09161 790 aaKnown RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 MGAT3Q09327 533 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 TGIF1Q15583 401 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 HSP90AA4PQ58FG1 418 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 MPP7Q5T2T1 576 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ATF7IP2Q5U623 682 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 AGAP6Q5VW22 663 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ZNF544Q6NX49 715 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ALKAL1Q6UXT8 129 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ZNF730Q6ZMV8 503 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CBWD2Q8IUF1 395 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CREBRFQ8IUR6 639 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 FAM71AQ8IYT1 594 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 NHLRC2Q8NBF2 726 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ZNF564Q8TBZ8 553 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 SPATA18Q8TC71 538 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ATP6V1E2Q96A05 226 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 ZNF799Q96GE5 643 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CCDC42Q96M95 316 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CCT8L2Q96SF2 557 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 COPS7BQ9H9Q2 264 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 NHEJ1Q9H9Q4 299 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 RRAGDQ9NQL2 400 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 RAB20Q9NX57 234 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 RBAKQ9NYW8 714 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 LCMT1Q9UIC8 334 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 CDH7Q9ULB5 785 aa2.75□□□□□ -1.97
VRK1-207ENST00000557352 NUP210Q8TEM1 1887 aaPredicted RBP2.75□□□□□ -1.97
VRK1-207ENST00000557352 MYO7AQ13402 2215 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 FAM170AA1A519 330 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ILVBLA1L0T0 632 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 CCDC162PA2VCL2 907 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ANKDD1BA6NHY2 528 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 M0QZ92 97 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 PES1O00541 588 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 SLC30A4O14863 429 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ZNF263O14978 683 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 SELENOFO60613 162 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 GRAP2O75791 330 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ERLIN2O94905 339 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 LSM8O95777 96 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 HLA-DRAP01903 254 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TNNC2P02585 160 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 PAEPP09466 180 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 P4HA1P13674 534 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms