RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 WDR45Q9Y484 360 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 PCDHB14Q9Y5E9 798 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 FAM215AQ9Y5M1 114 aa9.69□□□□□ -0.86
LINC00239-201ENST00000556973 DNAJC13O75165 2243 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 MYO7BQ6PIF6 2116 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NCOA6Q14686 2063 aaPredicted RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 A0A096LPI6 279 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NPIPA5A0A0B4J1W7 369 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 PRAMEF27A3QJZ7 478 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NPIPA7E9PJI5 369 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 GTPBP1O00178 669 aaKnown RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 CLIC1O00299 241 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 GMFGO60234 142 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 EIF4E2O60573 245 aaKnown RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 UGT2B17O75795 530 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NPIPA8P0DM63 369 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 GLI4P10075 376 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 PEPDP12955 493 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 CRATP43155 626 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 P2RX1P51575 399 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NUP107P57740 925 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 B3GALT5-AS1P59052 145 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 CD226Q15762 336 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF630Q2M218 657 aaPredicted RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 COX20Q5RI15 118 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 DCST1Q5T197 706 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 LRIF1Q5T3J3 769 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 TYW3Q6IPR3 259 aaKnown RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 RPRMLQ8N4K4 120 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 OR10Q1Q8NGQ4 319 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 TSPEARQ8WU66 669 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 TRNT1Q96Q11 434 aaKnown RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF385DQ9H6B1 395 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 MTHFD2LQ9H903 347 aaPredicted RBP9.68□□□□□ -0.86
LINC00239-201ENST00000556973 CALHM2Q9HA72 323 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 STOML1Q9UBI4 398 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 CARD8Q9Y2G2 431 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF337Q9Y3M9 751 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 HIVEP3Q5T1R4 2406 aa9.68□□□□□ -0.86
LINC00239-201ENST00000556973 A1L4Q6 167 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 OR2M5A3KFT3 312 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 SERINC4A6NH21 518 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CD8B2A6NJW9 211 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 NR5A2O00482 541 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 DYNC1I1O14576 645 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF264O43296 627 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 HCRTR2O43614 444 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 KIAA0513O60268 411 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 H6PDO95479 791 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CLDN14O95500 239 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 NR2F1P10589 423 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF708P17019 499 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CAPN3P20807 821 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 PPIBP23284 216 aaKnown RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 TIMP3P35625 211 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 STARP49675 285 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 LHX2P50458 406 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF41P51814 821 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 MVDP53602 400 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 SUMO3P55854 103 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 EEFSECP57772 596 aaKnown RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 HPCAP84074 193 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF117Q03924 483 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CHRNEQ04844 493 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 FUT5Q11128 374 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 RGNQ15493 299 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 SYPL1Q16563 259 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 TMEM44Q2T9K0 475 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 PAGE3Q5JUK9 113 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 PDZK1Q5T2W1 519 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 RAET1LQ5VY80 246 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 NSUN5P2Q63ZY6 315 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CGB2Q6NT52 195 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CBLN3Q6UW01 205 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ARSKQ6UWY0 536 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 DNAJC14Q6Y2X3 702 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 FRRS1Q6ZNA5 592 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 LRRC74BQ6ZQY2 392 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CHMP1BQ7LBR1 199 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 LACC1Q8IV20 430 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF619Q8N2I2 560 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF614Q8N883 585 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 TOR1AIP2Q8NFQ8 470 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 LILRB4Q8NHJ6 448 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CA5BP1Q8WTZ4 195 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ASB5Q8WWX0 329 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZBTB8AQ96BR9 441 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 SDCCAG3Q96C92 435 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 SH3YL1Q96HL8 342 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ZNF317Q96PQ6 595 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 RAD21L1Q9H4I0 556 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.67□□□□□ -0.86
LINC00239-201ENST00000556973 CALML5Q9NZT1 146 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 P2RX2Q9UBL9 471 aa9.67□□□□□ -0.86
LINC00239-201ENST00000556973 KCNE5Q9UJ90 142 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms