RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	EQTN	Q9NQ60	294 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CD274	Q9NZQ7	290 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	BFAR	Q9NZS9	450 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CNIH4	Q9P003	139 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MYEF2	Q9P2K5	600 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CHRNA9	Q9UGM1	479 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	C3orf18	Q9UK00	162 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRIP1	Q9Y3R0	1128 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	POLR3H	Q9Y535	204 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	TEX264	Q9Y6I9	313 aa		4.88	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZNF541	Q9H0D2	1346 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RIMBP3C	A6NJZ7	1639 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RIMBP3B	A6NNM3	1639 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RIMBP3	Q9UFD9	1639 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		A0A0X1KG70	313 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		A0A1B0GVM2	712 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	LNP1	A1A4G5	178 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC22A23	A1A5C7	686 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MGAT4D	A6NG13	374 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ERI2	A8K979	691 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PP2D1	A8MPX8	630 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		A8MUI8	341 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NPIPB11	E5RHQ5	1161 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC33A1	O00400	549 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRID2	O43424	1007 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SPRY1	O43609	319 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	BUD23	O43709	281 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RNASEH1	O60930	286 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	LRCH4	O75427	683 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NDUFS3	O75489	264 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SRP72	O76094	671 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR6B1	O95007	311 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GSR	P00390	522 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PIGR	P01833	764 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MMP10	P09238	476 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GIMD1	P0DJR0	217 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZP3	P21754	424 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	UCP1	P25874	307 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CCND3	P30281	292 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CDA	P32320	146 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SHMT2	P34897	504 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	KCNJ3	P48549	501 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CAMP	P49913	170 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RBP2	P50120	134 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	BLK	P51451	505 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CLDN2	P57739	230 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RGS8	P57771	180 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HILS1	P60008	231 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SNAP25	P60880	206 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MRPS11	P82912	194 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	RPL36A	P83881	106 aa	Known RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ILK	Q13418	452 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MED21	Q13503	144 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRAP	Q13588	217 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DLG2	Q15700	870 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC1A5	Q15758	541 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GRK1	Q15835	563 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PSMD5	Q16401	504 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GUK1	Q16774	197 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	COL28A1	Q2UY09	1125 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CRY2	Q49AN0	593 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GPR33	Q49SQ1	333 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ATP13A5	Q4VNC0	1218 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HSD17B12	Q53GQ0	312 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ARL13A	Q5H913	290 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OR2B11	Q5JQS5	317 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SPANXN2	Q5MJ10	180 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PRR5L	Q6MZQ0	368 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM151B	Q6UXP7	276 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CENPU	Q71F23	418 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLC16A14	Q7RTX9	510 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ISCA2	Q86U28	154 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZNF329	Q86UD4	541 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	GPR180	Q86V85	440 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZNF573	Q86YE8	665 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	FAM71A	Q8IYT1	594 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZNF34	Q8IZ26	560 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CLIP4	Q8N3C7	705 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CADM2	Q8N3J6	435 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	MARVELD2	Q8N4S9	558 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PQLC3	Q8N755	202 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839		Q8N9G6	341 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	WDSUB1	Q8N9V3	476 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NHLRC2	Q8NBF2	726 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	DNAAF1	Q8NEP3	725 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	STOML3	Q8TAV4	291 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	ACTRT1	Q8TDG2	376 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	NEK7	Q8TDX7	302 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CA5BP1	Q8WTZ4	195 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	CKAP2	Q8WWK9	683 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	OIT3	Q8WWZ8	545 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	HAVCR1	Q96D42	359 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	C14orf144	Q96I85	54 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	SLITRK1	Q96PX8	696 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PFDN5	Q99471	154 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	PAFAH2	Q99487	392 aa		4.87	□□□□□ -1.63
RALGAPA1-215	ENST00000556839	EBNA1BP2	Q99848	306 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms