RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 SERPINE1P05121 402 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 HK1P19367 917 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TCEA1P23193 301 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ME2P23368 584 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 GFRA1P56159 465 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PDE7AQ13946 482 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SGCBQ16585 318 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 UGT3A2Q3SY77 523 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 GLYR1Q49A26 553 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 C6orf136Q5SQH8 315 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 CEP85LQ5SZL2 805 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 IL23RQ5VWK5 629 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MARCH3Q86UD3 253 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MISPQ8IVT2 679 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 UBQLNLQ8IYU4 475 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ADAMTS15Q8TE58 950 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 OR5P2Q8WZ92 322 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PIK3R3Q92569 461 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MOAP1Q96BY2 351 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 INTS12Q96CB8 462 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 NTNG2Q96CW9 530 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 FCRL1Q96LA6 429 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 PAIP2Q9BPZ3 127 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 TUBA1CQ9BQE3 449 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 HOXD1Q9GZZ0 328 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 SSU72Q9NP77 194 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 UBQLN4Q9NRR5 601 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ZCCHC3Q9NUD5 404 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 NOP53Q9NZM5 478 aaKnown RBP6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ZIM2Q9NZV7 527 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 MED11Q9P086 117 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 NTMQ9P121 344 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 NDRG3Q9UGV2 375 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 ZDHHC2Q9UIJ5 367 aa6.64□□□□□ -1.35
SCFD1-222ENST00000556768 A0A087WZY1 265 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 SLC22A20A6NK97 555 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 DUXAA6NLW8 204 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 CLCA1A8K7I4 914 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 CASKO14936 926 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 PRODHO43272 600 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZIC3O60481 467 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ERLIN1O75477 346 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 NKX2-2O95096 273 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ADH6P28332 368 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 FRKP42685 505 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 CCT3P49368 545 aaKnown RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 STARP49675 285 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 LHX2P50458 406 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 RPL14P50914 215 aaKnown RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF41P51814 821 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF136P52737 540 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF844Q08AG5 666 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 CHI3L2Q15782 390 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 SMU1Q2TAY7 513 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 PGS1Q32NB8 556 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 FBXL19-AS1Q494R0 122 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 HHATQ5VTY9 493 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 SEM1Q6ZVN7 128 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 CDH24Q86UP0 819 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 EXOC3L1Q86VI1 746 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZZZ3Q8IYH5 903 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 SLC16A11Q8NCK7 471 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 NAXEQ8NCW5 288 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 OR56A1Q8NGH5 318 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 FAM222BQ8WU58 562 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ZIM3Q96PE6 472 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 C1orf50Q9BV19 199 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 BTBD2Q9BX70 525 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 PRRG4Q9BZD6 226 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 PIGMQ9H3S5 423 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 DUSP22Q9NRW4 184 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 PAQR5Q9NXK6 330 aaPredicted RBP6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ATP6V1HQ9UI12 483 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 ACTL7BQ9Y614 415 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 DNAJC13O75165 2243 aa6.63□□□□□ -1.35
SCFD1-222ENST00000556768 H3BML4 177 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GMFGO60234 142 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 KCNK2O95069 426 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 NUDT14O95848 222 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 HMGN2P05204 90 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CRHP06850 196 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 NGFRP08138 427 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 LAMP1P11279 417 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FCGR2AP12318 317 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CREB1P16220 341 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF708P17019 499 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 TBXA2RP21731 343 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ETV4P43268 484 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SLC1A6P48664 564 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 AGFG1P52594 562 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GAS1P54826 345 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 WNT3P56703 355 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ABCE1P61221 599 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 POU6F2P78424 691 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SORDQ00796 357 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 EMX2Q04743 252 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 STX3Q13277 289 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FGFBP1Q14512 234 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 LASP1Q14847 261 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms