RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 STX1BP61266 288 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 HBA1P69905 142 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SRYQ05066 204 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 FOXF2Q12947 444 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 RCAN2Q14206 197 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SF3B4Q15427 424 aaKnown RBP eCLIP9.33□□□□□ -0.927e-19■■■■□ 22
SHMT2-224ENST00000556737 CD226Q15762 336 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 LSM12Q3MHD2 195 aaKnown RBP9.33□□□□□ -0.92
SHMT2-224ENST00000556737 RAET1LQ5VY80 246 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 CDC73Q6P1J9 531 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 MTDHQ86UE4 582 aaKnown RBP9.33□□□□□ -0.92
SHMT2-224ENST00000556737 CLECL1Q8IZS7 167 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 NATD1Q8N6N6 113 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 COX18Q8N8Q8 333 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 OR56A1Q8NGH5 318 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 OR5M1Q8NGP8 315 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 OR5AK3PQ8NH89 298 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 DUSP19Q8WTR2 217 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 JADE3Q92613 823 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 CDS1Q92903 461 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 DTNBP1Q96EV8 351 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 NPAS1Q99742 590 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 CCDC28BQ9BUN5 200 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 DUSP26Q9BV47 211 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 TBL1XR1Q9BZK7 514 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 PIGUQ9H490 435 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 MCCC2Q9HCC0 563 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SDHAF3Q9NRP4 125 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 GIN1Q9NXP7 522 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 JKAMPQ9P055 326 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 KCNN3Q9UGI6 736 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 SNX8Q9Y5X2 465 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 KCNE3Q9Y6H6 103 aa9.33□□□□□ -0.92
SHMT2-224ENST00000556737 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 SYT5O00445 386 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 UBDO15205 165 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 GMFGO60234 142 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 SCN2BO60939 215 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 RCBTB2O95199 551 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TGM6O95932 706 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 IL18BPO95998 194 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 IL2RAP01589 272 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ALDOCP09972 364 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TMIGD3P0DMS9 266 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 LBPP18428 481 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 POU3F2P20265 443 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 CTSSP25774 331 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 CCT3P49368 545 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 AGFG1P52594 562 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 PHC1P78364 1004 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 POU6F2P78424 691 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 C17orf67Q0P5P2 114 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TP53BP2Q13625 1128 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 SNTB1Q13884 538 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 BCL2A1Q16548 175 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ZSCAN26Q16670 478 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 OR4F3Q6IEY1 312 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 OGFOD2Q6N063 350 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ARSKQ6UWY0 536 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 CCDC121Q6ZUS5 278 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TRPM8Q7Z2W7 1104 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 GATSQ8NAP1 163 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 OR8J2Q8NGG1 315 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ACTRT2Q8TDY3 377 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 RNASE6Q93091 150 aaKnown RBP9.32□□□□□ -0.92
SHMT2-224ENST00000556737 WNT2BQ93097 391 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TESCQ96BS2 214 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 BTBD2Q9BX70 525 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ACTRT3Q9BYD9 372 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 ZNF337Q9Y3M9 751 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 MED12LQ86YW9 2145 aa9.32□□□□□ -0.92
SHMT2-224ENST00000556737 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NPIPA5A0A0B4J1W7 369 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 RNF103-CHMP3A0A140T963 221 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 C7orf72A4D263 438 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 CCT8L1PA6NM43 557 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NPIPA7E9PJI5 369 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NPIPB9F8W1W9 429 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 RNASET2O00584 256 aaKnown RBP9.31□□□□□ -0.92
SHMT2-224ENST00000556737 OIP5O43482 229 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NDUFB5O43674 189 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 TNFSF13O75888 250 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NPIPA8P0DM63 369 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 PEPDP12955 493 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 ZNF17P17021 662 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 PSMA4P25789 261 aaKnown RBP9.31□□□□□ -0.92
SHMT2-224ENST00000556737 SOAT1P35610 550 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 CLK3P49761 638 aaKnown RBP9.31□□□□□ -0.92
SHMT2-224ENST00000556737 DGKQP52824 942 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 NME5P56597 212 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 CLDN20P56880 219 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 RPS26P62854 115 aaKnown RBP9.31□□□□□ -0.92
SHMT2-224ENST00000556737 PGS1Q32NB8 556 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 PLPPR5Q32ZL2 321 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 SPDYE7PQ495Y7 208 aa9.31□□□□□ -0.92
SHMT2-224ENST00000556737 GLYR1Q49A26 553 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-224ENST00000556737 DCST2Q5T1A1 773 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms