RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	TAS2R7	Q9NYW3	318 aa		11.27	□□□□□ -0.61
SHMT2-223	ENST00000556689	GDF2	Q9UK05	429 aa	Predicted RBP	11.27	□□□□□ -0.61
SHMT2-223	ENST00000556689	ABCA1	O95477	2261 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689		A0A1W2PRB8	838 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	GXYLT2	A0PJZ3	443 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	C7orf72	A4D263	438 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	DPRX	A6NFQ7	191 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ALG1L2	C9J202	215 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	SSX4	O60224	188 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	GPRIN2	O60269	458 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	NTN1	O95631	604 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ADA	P00813	363 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	IGKV1D-16	P01601	117 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	SBK3	P0C264	359 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	PSMA4	P25789	261 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	NTS	P30990	170 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	SERPINB9	P50453	376 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF41	P51814	821 aa	Predicted RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	P2RY6	Q15077	328 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	RNPS1	Q15287	305 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	UNC50	Q53HI1	259 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	SPDYA	Q5MJ70	313 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	TFAP2E	Q6VUC0	442 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	GPRIN3	Q6ZVF9	776 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	NUFIP2	Q7Z417	695 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	GSPT2	Q8IYD1	628 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	CNPY4	Q8N129	248 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	LILRA2	Q8N149	483 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF619	Q8N2I2	560 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	OR4C3	Q8NH37	302 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	CDC26	Q8NHZ8	85 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	PIWIL2	Q8TC59	973 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	PIK3R3	Q92569	461 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	KISS1R	Q969F8	398 aa	Predicted RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	RNF145	Q96MT1	663 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	AMDHD1	Q96NU7	426 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF382	Q96SR6	550 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	KCNK17	Q96T54	332 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	TRIM2	Q9C040	744 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	GRIP2	Q9C0E4	1043 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	ACSS3	Q9H6R3	686 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	TMEM185B	Q9H7F4	350 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	TIGAR	Q9NQ88	270 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	MIEF1	Q9NQG6	463 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	MED17	Q9NVC6	651 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAIM	Q9NVQ4	179 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	SIRT5	Q9NXA8	310 aa		11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	CISD1	Q9NZ45	108 aa	Known RBP	11.26	□□□□□ -0.61
SHMT2-223	ENST00000556689	DYNC1I1	O14576	645 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	OXSR1	O95747	527 aa	Predicted RBP	11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	NGFR	P08138	427 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	PYGB	P11216	843 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	TAC1	P20366	129 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	SLC18A2	Q05940	514 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	BSPH1	Q075Z2	132 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF763	Q0D2J5	394 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	ITGAD	Q13349	1161 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	SLC29A2	Q14542	456 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	NRF1	Q16656	503 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	PLPPR5	Q32ZL2	321 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	ZNF678	Q5SXM1	525 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	C6orf52	Q5T4I8	152 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAM71E1	Q6IPT2	247 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	ATG4D	Q86TL0	474 aa	Predicted RBP	11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	TRABD2A	Q86V40	505 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	TUSC5	Q8IXB3	177 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	GATS	Q8NAP1	163 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	KBTBD8	Q8NFY9	601 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	GPR151	Q8TDV0	419 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	ABHD3	Q8WU67	409 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	KLHL15	Q96M94	604 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	BEX2	Q9BXY8	128 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	WBP11	Q9Y2W2	641 aa	Known RBP	11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	PCNX3	Q9H6A9	2034 aa		11.25	□□□□□ -0.61
SHMT2-223	ENST00000556689	IGHV4-30-2	A0A087WSY4	118 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689		A0A087WUV0	522 aa	Predicted RBP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	SERTM1	A2A2V5	107 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	FAM234B	A2RU67	622 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	DLX3	O60479	287 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	RAMP1	O60894	148 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	PRKD3	O94806	890 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	YES1	P07947	543 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	IFI6	P09912	130 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	PRPS2	P11908	318 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	HPGD	P15428	266 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	IMPDH1	P20839	514 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	ECHS1	P30084	290 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	SFTPD	P35247	375 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	HTR6	P50406	440 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	DSCR9	P59020	149 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	IFFO1	Q0D2I5	559 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	TMEM249	Q2WGJ8	235 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	VPS26B	Q4G0F5	336 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	AGAP6	Q5VW22	663 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	DTX2	Q86UW9	622 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	RELL1	Q8IUW5	271 aa		11.24	□□□□□ -0.61
SHMT2-223	ENST00000556689	BANP	Q8N9N5	519 aa		11.24	□□□□□ -0.61

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