RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-219ENST00000556432 CARTPTQ16568 116 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 TCHHL1Q5QJ38 904 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-219ENST00000556432 FAM219BQ5XKK7 198 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 C11orf71Q6IPW1 123 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 APOOLQ6UXV4 268 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 CYS1Q717R9 158 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 FCRLAQ7L513 359 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 LRRC8AQ8IWT6 810 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 LILRA2Q8N149 483 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-219ENST00000556432 C1orf159Q96HA4 380 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 RADILQ96JH8 1075 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 VPS11Q9H270 941 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 DPH5Q9H2P9 285 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 RNF14Q9UBS8 474 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 DMGDHQ9UI17 866 aaKnown RBP12.33□□□□□ -0.44
ACTN1-219ENST00000556432 NFU1Q9UMS0 254 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
ACTN1-219ENST00000556432 GXYLT2A0PJZ3 443 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 C7orf72A4D263 438 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 E7EQL1 145 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 EIF3HO15372 352 aaKnown RBP eCLIP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 LY6HO94772 140 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 YES1P07947 543 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 BMP4P12644 408 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 HPGDP15428 266 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 ITGA2P17301 1181 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 TCP1P17987 556 aaKnown RBP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 GGT1P19440 569 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 CFPP27918 469 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 SLC18A2Q05940 514 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 SPOCK1Q08629 439 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 NAB1Q13506 487 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 PLPPR5Q32ZL2 321 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 TECRLQ5HYJ1 363 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 BHLHB9Q6PI77 547 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 Q6ZSR9 355 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 Q6ZT83 130 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 MEX3DQ86XN8 651 aaKnown RBP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 C16orf78Q8WTQ4 265 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 MSI2Q96DH6 328 aaKnown RBP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 EBPLQ9BY08 206 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 L2HGDHQ9H9P8 463 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 HHATLQ9HCP6 504 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 EQTNQ9NQ60 294 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 NPAP1Q9NZP6 1156 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 C19orf53Q9UNZ5 99 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-219ENST00000556432 MGAT4BQ9UQ53 548 aa12.32□□□□□ -0.44
ACTN1-219ENST00000556432 MGAM2Q2M2H8 2515 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 A0A087WV62 115 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF814B7Z6K7 855 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 STX16-NPEPL1H3BU86 382 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 H7C417 338 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 STX16O14662 325 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 TGFAP01135 160 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 DHRS4L1P0CG22 281 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 SHC1P29353 583 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 TYK2P29597 1187 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 NTSP30990 170 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 SRP14P37108 136 aaKnown RBP12.31□□□□□ -0.44
ACTN1-219ENST00000556432 ZNF83P51522 516 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 EFNA4P52798 201 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 CHRNEQ04844 493 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 ACSM2AQ08AH3 577 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 IQCCQ4KMZ1 466 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 TIMM23BQ5SRD1 257 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 ACSM2BQ68CK6 577 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 SSX8Q7RTT4 187 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 TRABD2AQ86V40 505 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 ATP6V1C2Q8NEY4 427 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 GPR151Q8TDV0 419 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 PIK3R3Q92569 461 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 GPR78Q96P69 363 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 PIMREGQ9BSJ6 248 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 PRSS50Q9UI38 385 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 TMCO1Q9UM00 188 aa12.31□□□□□ -0.44
ACTN1-219ENST00000556432 SVEP1Q4LDE5 3571 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 IGHV3-15A0A0B4J1V0 119 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 GJE1A6NN92 205 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 C9JVG2 144 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 UPK1AO00322 258 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 MANBAO00462 879 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 PPP6CO00743 305 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 KCNAB3O43448 404 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 SLITRK5O94991 958 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 OR4F21O95013 312 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 NUDT14O95848 222 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 IGKV1D-16P01601 117 aa12.3□□□□□ -0.44
ACTN1-219ENST00000556432 KRT6AP02538 564 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms