RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 NPIPA8P0DM63 369 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 PEPDP12955 493 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 COX6B1P14854 86 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF17P17021 662 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 POU3F2P20265 443 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-206ENST00000556375 CHI3L1P36222 383 aaPredicted RBP10.43□□□□□ -0.74
SLIRP-206ENST00000556375 MRPL19P49406 292 aaKnown RBP10.43□□□□□ -0.74
SLIRP-206ENST00000556375 ATP12AP54707 1039 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 TXNL4AP83876 142 aaKnown RBP10.43□□□□□ -0.74
SLIRP-206ENST00000556375 TFF3Q07654 80 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 TMEM44Q2T9K0 475 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 SLC25A35Q3KQZ1 300 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 KLHL26Q53HC5 615 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SLIRP-206ENST00000556375 HEPHL1Q6MZM0 1159 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 MSANTD1Q6ZTZ1 278 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 C16orf62Q7Z3J2 963 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 ADGRE4PQ86SQ3 457 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 MIER2Q8N344 545 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 ACBD4Q8NC06 268 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 NAXEQ8NCW5 288 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 MAGEB18Q96M61 343 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 UCN2Q96RP3 112 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 TRIB1Q96RU8 372 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 SDF2Q99470 211 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 TUBA1CQ9BQE3 449 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 NMUR2Q9GZQ4 415 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF350Q9GZX5 532 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 KCNJ16Q9NPI9 418 aa10.43□□□□□ -0.74
SLIRP-206ENST00000556375 NKX2-6A6NCS4 301 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 CCDC154A6NI56 674 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 CLCA1A8K7I4 914 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 H3BNH8 94 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 RFXANKO14593 260 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 HCRTR2O43614 444 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 GMFGO60234 142 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 KIAA0513O60268 411 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 STX11O75558 287 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 IL2RAP01589 272 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 GUSBP08236 651 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 CDKN2CP42773 168 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 STARP49675 285 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 IDH3AP50213 366 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF41P51814 821 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 AQP5P55064 265 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 STX1BP61266 288 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF117Q03924 483 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 SRYQ05066 204 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ARHGAP11BQ3KRB8 267 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 TIGD2Q4W5G0 525 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ATAD3BQ5T9A4 648 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ARSKQ6UWY0 536 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 LIX1LQ8IVB5 337 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 GTPBP8Q8N3Z3 284 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 TNIP2Q8NFZ5 429 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 OR9I1Q8NGQ6 314 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 B4GALNT2Q8NHY0 566 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 PHOSPHO1Q8TCT1 267 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 OIT3Q8WWZ8 545 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 STON2Q8WXE9 905 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ZBTB8AQ96BR9 441 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 SH3YL1Q96HL8 342 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ZFP3Q96NJ6 502 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 SPOCK3Q9BQ16 436 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 TREX2Q9BQ50 279 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 EBF4Q9BQW3 602 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 INPP5KQ9BT40 448 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 CCDC28BQ9BUN5 200 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 UCK2Q9BZX2 261 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ENKD1Q9H0I2 346 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 NPDC1Q9NQX5 325 aaPredicted RBP10.42□□□□□ -0.74
SLIRP-206ENST00000556375 POLE3Q9NRF9 147 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 MED17Q9NVC6 651 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF446Q9NWS9 450 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 CLCF1Q9UBD9 225 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 VDAC3Q9Y277 283 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 DTNAQ9Y4J8 743 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 FBN2P35556 2912 aa10.42□□□□□ -0.74
SLIRP-206ENST00000556375 HEATR5AQ86XA9 2040 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 FAM234BA2RU67 622 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 H3BML4 177 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 DVL2O14641 736 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 OR12D1P0DN82 309 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 IGFBP2P18065 325 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 MAGEA8P43361 318 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 ANXA11P50995 505 aaKnown RBP10.41□□□□□ -0.74
SLIRP-206ENST00000556375 POLR2JP52435 117 aaKnown RBP10.41□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF136P52737 540 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 CASP9P55211 416 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 IRX1P78414 480 aaPredicted RBP10.41□□□□□ -0.74
SLIRP-206ENST00000556375 FUT5Q11128 374 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 ZNF141Q15928 474 aa10.41□□□□□ -0.74
SLIRP-206ENST00000556375 PLPPR5Q32ZL2 321 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms