RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 PCDH15Q96QU1 1955 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 A0A1B0GX78 115 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TMX2-CTNND1H3BSU7 103 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 DSCR3O14972 297 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 YKT6O15498 198 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 KLF4O43474 513 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 PDGFBP01127 241 aaPredicted RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 ADORA3P0DMS8 318 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 DBTP11182 482 aaKnown RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CDK4P11802 303 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TDGF1P13385 188 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 FBLP22087 321 aaKnown RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 GPR4P46093 362 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 OCA2Q04671 838 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 SQSTM1Q13501 440 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 AQP6Q13520 282 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 FGFBP1Q14512 234 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 SPCS2Q15005 226 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 HLA-BQ31612 363 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 PLK5Q496M5 336 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 ZNF367Q7RTV3 350 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 ZNF550Q7Z398 422 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 MEX3DQ86XN8 651 aaKnown RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TMEM151BQ8IW70 566 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CYP4Z2PQ8N1L4 340 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CLDN22Q8N7P3 220 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 BCORP1Q8N888 145 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TMEM163Q8TC26 289 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 SAP25Q8TEE9 199 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CNOT9Q92600 299 aaKnown RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 PIGKQ92643 395 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 ZNF501Q96CX3 271 aaPredicted RBP9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 HS6ST2Q96MM7 605 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 NUDT22Q9BRQ3 303 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TSSK6Q9BXA6 273 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TRIM2Q9C040 744 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 DSN1Q9H410 356 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 TBC1D23Q9NUY8 699 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 CACNA1IQ9P0X4 2223 aa9.33□□□□□ -0.92
EFCAB11-209ENST00000556005 SDK1Q7Z5N4 2213 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 IGKV3D-11A0A0A0MRZ8 115 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CPED1A4D0V7 1026 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 NPIPB9F8W1W9 429 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 M0R082 166 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 M0R3G1 203 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 POLR1CO15160 346 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PIP5K1CO60331 668 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 NTN1O95631 604 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PTHP01270 115 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CSTF2P33240 577 aaKnown RBP eCLIP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 RORAP35398 523 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 LIPAP38571 399 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 RNF144AP50876 292 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SLC37A1P57057 533 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CSTF1Q05048 431 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PRKCDQ05655 676 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SIGLEC14Q08ET2 396 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 KLHL22Q53GT1 634 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SYT14P1Q58G82 188 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CLEC12AQ5QGZ9 265 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PRAMEF17Q5VTA0 474 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 RNLSQ5VYX0 342 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 ZNF620Q6ZNG0 422 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 KANSL1Q7Z3B3 1105 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 LSMEM1Q8N8F7 131 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 POGLUT1Q8NBL1 392 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 OR2T33Q8NG76 320 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 OR8D4Q8NGM9 314 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 WDR36Q8NI36 951 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 OIT3Q8WWZ8 545 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 LGALS12Q96DT0 336 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SLC46A1Q96NT5 459 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SLC7A5P2Q9GIP4 190 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 HOXD1Q9GZZ0 328 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 MED17Q9NVC6 651 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 DNAJB12Q9NXW2 375 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 MRTO4Q9UKD2 239 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SRPK3Q9UPE1 567 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 ERGIC3Q9Y282 383 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 TMEM5Q9Y2B1 443 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 MED31Q9Y3C7 131 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CDH10Q9Y6N8 788 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 A0A0B4J2E0 115 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 A0A1B0GX12 115 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 IRGMA1A4Y4 181 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 SYNDIG1LA6NDD5 238 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 UNC119BA6NIH7 251 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PRODHO43272 600 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CHP2O43745 196 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 LYPD3O95274 346 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 CLPSP04118 112 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 HMGN1P05114 100 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 BMP7P18075 431 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 TGFBR2P37173 567 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 PPICP45877 212 aa9.32□□□□□ -0.92
EFCAB11-209ENST00000556005 ACY1Q03154 408 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms