RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 ADAM21Q9UKJ8 722 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 USF3Q68DE3 2245 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 HEATR5AQ86XA9 2040 aa13.83□□□□□ -0.2
NEDD1-207ENST00000555114 RNF223E7ERA6 249 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 CLOCKO15516 846 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 IGKV1D-16P01601 117 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 OPN1LWP04000 364 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 ABHD2P08910 425 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 MYL2P10916 166 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 NID1P14543 1247 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 DDX5P17844 614 aaKnown RBP13.82□□□□□ -0.2
NEDD1-207ENST00000555114 SERPINB4P48594 390 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 FOXA1P55317 472 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 CFAP157Q5JU67 520 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF551Q7Z340 670 aaPredicted RBP13.82□□□□□ -0.2
NEDD1-207ENST00000555114 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 GATSQ8NAP1 163 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 NUP43Q8NFH3 380 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 OR4C3Q8NH37 302 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 HSD17B8Q92506 261 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 OSTF1Q92882 214 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF764Q96H86 408 aaPredicted RBP13.82□□□□□ -0.2
NEDD1-207ENST00000555114 TMEM185BQ9H7F4 350 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 DCDC2Q9UHG0 476 aa13.82□□□□□ -0.2
NEDD1-207ENST00000555114 A0A0J9YW62 118 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 A0A1W2PP18 115 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 SEC22BO75396 215 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 URI1O94763 535 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 SOX30O94993 753 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 ALOX5P09917 674 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 ELK4P28324 431 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 MANFP55145 182 aaKnown RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 ZCCHC12Q6PEW1 402 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 LILRA2Q8N149 483 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 COX18Q8N8Q8 333 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 B4GALNT2Q8NHY0 566 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 RNF128Q8TEB7 428 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 SMAP2Q8WU79 429 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 HOXB13Q92826 284 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 KISS1RQ969F8 398 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 PPCDCQ96CD2 204 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 SH3YL1Q96HL8 342 aaPredicted RBP13.81□□□□□ -0.2
NEDD1-207ENST00000555114 REG4Q9BYZ8 158 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 ALG2Q9H553 416 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 LRTM1Q9HBL6 345 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 GP6Q9HCN6 339 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 FBXO34Q9NWN3 711 aa13.81□□□□□ -0.2
NEDD1-207ENST00000555114 A0A1W2PQD3 144 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 GOLGA8RI6L899 631 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 OVOL3O00110 214 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 SLC28A1O00337 649 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 UBFD1O14562 309 aaKnown RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 RGS14O43566 566 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 KCNK2O95069 426 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 UROSP10746 265 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 PSMA4P25789 261 aaKnown RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 SFTPDP35247 375 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 MAP3K8P41279 467 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 PRIM2P49643 509 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF844Q08AG5 666 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF239Q16600 458 aaKnown RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 SFRP5Q5T4F7 317 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 FIGNL1Q6PIW4 674 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 FRMD7Q6ZUT3 714 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 TRMT10CQ7L0Y3 403 aaKnown RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF527Q8NB42 609 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 ROBO4Q8WZ75 1007 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 JADE3Q92613 823 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 HS6ST2Q96MM7 605 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 POTEKPQ9BYX7 375 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 L2HGDHQ9H9P8 463 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 BARX1Q9HBU1 254 aaPredicted RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 FAIMQ9NVQ4 179 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 SH3BP4Q9P0V3 963 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 KLHL13Q9P2N7 655 aa13.8□□□□□ -0.2
NEDD1-207ENST00000555114 PSMC3IPQ9P2W1 217 aaPredicted RBP13.8□□□□□ -0.2
NEDD1-207ENST00000555114 RTTNQ86VV8 2226 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 H3BNH8 94 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 KIF2AO00139 706 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 GLRA3O75311 464 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 PRKD3O94806 890 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 NUDT14O95848 222 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 PYGBP11216 843 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ATP6V1C1P21283 382 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 PRPH2P23942 346 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ADH6P28332 368 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ECHS1P30084 290 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 P2RY6Q15077 328 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ZNF672Q499Z4 452 aaPredicted RBP13.79□□□□□ -0.2
NEDD1-207ENST00000555114 TFAP2EQ6VUC0 442 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 ZYG11AQ6WRX3 759 aa13.79□□□□□ -0.2
NEDD1-207ENST00000555114 FCRLAQ7L513 359 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms