RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CALHM2Q9HA72 323 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 NPDC1Q9NQX5 325 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ZNF337Q9Y3M9 751 aa9.65□□□□□ -0.86
SHMT2-213ENST00000554600 ITPR3Q14573 2671 aa9.65□□□□□ -0.87
SHMT2-213ENST00000554600 ZFHX3Q15911 3703 aa9.65□□□□□ -0.87
SHMT2-213ENST00000554600 C2CD3Q4AC94 2353 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MBD3L4A6NDZ8 208 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MBD3L3A6NE82 208 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MBD3L5A6NJ08 208 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 HMGB1P1B2RPK0 211 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 EEF1E1-BLOC1S5C9J1V9 151 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 KLF11O14901 512 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 UBDO15205 165 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 EEF1E1O43324 174 aaKnown RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 NGFRP08138 427 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 TMIGD3P0DMS9 266 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 OR12D1P0DN82 309 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 IDO1P14902 403 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF708P17019 499 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MSX1P28360 303 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 TIMP3P35625 211 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 KHKP50053 298 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 CCR4P51679 360 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF136P52737 540 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 PHC1P78364 1004 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MYBPHQ13203 477 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 GPR68Q15743 365 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ARSKQ6UWY0 536 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MISPQ8IVT2 679 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 TRIML2Q8N7C3 387 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 C9orf106Q8NAJ2 232 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 GOT1L1Q8NHS2 421 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 B4GALNT2Q8NHY0 566 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 RFWD2Q8NHY2 731 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 MBD3L2Q8NHZ7 208 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ACTRT2Q8TDY3 377 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 RAB8BQ92930 207 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 INTS12Q96CB8 462 aaKnown RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 TEX37Q96LM6 180 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 OR52B2Q96RD2 323 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 PANX1Q96RD7 426 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 TM9SF2Q99805 663 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 SLC35A5Q9BS91 424 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 ENKD1Q9H0I2 346 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 OR51I1Q9H343 314 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 INTS9Q9NV88 658 aaKnown RBP9.64□□□□□ -0.87
SHMT2-213ENST00000554600 EXD2Q9NVH0 621 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 STOML1Q9UBI4 398 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 GPR45Q9Y5Y3 372 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 USH1CQ9Y6N9 552 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 DCHS2Q6V1P9 2916 aa9.64□□□□□ -0.87
SHMT2-213ENST00000554600 CSMD1Q96PZ7 3565 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 A0A087WZY1 265 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 UQCRHLA0A096LP55 91 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 IGLV3-32A0A0A0MS00 114 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 A0A1W2PQD3 144 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SLC22A20A6NK97 555 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 H0YC42 278 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 LINC01387J3KSC0 135 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 POLR3GO15318 223 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SCN2BO60939 215 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SLC22A3O75751 556 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 CYP7B1O75881 506 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 AK1P00568 194 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 GSNP06396 782 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 PGRP06401 933 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 CTSSP25774 331 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 IL12AP29459 219 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SSTR2P30874 369 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 OPRM1P35372 400 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 ASCL1P50553 236 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 ATP12AP54707 1039 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 TPD52P55327 224 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 RIPPLY3P57055 190 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 EEFSECP57772 596 aaKnown RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 HPCAP84074 193 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 ZNF117Q03924 483 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 TLE4Q04727 773 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 TFF3Q07654 80 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SNTB1Q13884 538 aaKnown RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 CD226Q15762 336 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 BCL2A1Q16548 175 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SGCBQ16585 318 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 GLYR1Q49A26 553 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 GPAT3Q53EU6 434 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 DNAJC14Q6Y2X3 702 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 OLIG3Q7RTU3 272 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 MAVSQ7Z434 540 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 GCNT2Q8N0V5 402 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 RELL2Q8NC24 303 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 GLB1L3Q8NCI6 653 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-213ENST00000554600 WNT2BQ93097 391 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 C7orf26Q96N11 449 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 SDF2Q99470 211 aa9.63□□□□□ -0.87
SHMT2-213ENST00000554600 INPP5KQ9BT40 448 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms