RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 TAS2R41P59536 307 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 DBPQ10586 325 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MAPK14Q16539 360 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PROX2Q3B8N5 592 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PGBD2Q6P3X8 592 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 OR2L13Q8N349 312 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF614Q8N883 585 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PMEPA1Q969W9 287 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ANKRD9Q96BM1 317 aaPredicted RBP10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PRRG3Q9BZD7 231 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 BCL2L10Q9HD36 194 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 POLHQ9Y253 713 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 WDR45Q9Y484 360 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 SPACA6W5XKT8 324 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 TMEM265A0A087WTH1 108 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PNMA8CA0A1B0GUJ8 204 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 LEUTXA8MZ59 168 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 M0R082 166 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MAOAP21397 527 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF45Q02386 682 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 TIGD6Q17RP2 521 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 ZAR1Q86SH2 424 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 AMER2Q8N7J2 671 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 OR4K5Q8NGD3 323 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MOAP1Q96BY2 351 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 UCK2Q9BZX2 261 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 SEMA4GQ9NTN9 838 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 MS4A12Q9NXJ0 267 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 CNIH4Q9P003 139 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 IL20RAQ9UHF4 553 aa10.87□□□□□ -0.67
SHMT2-212ENST00000554467 PRG2P13727 222 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 MMP11P24347 488 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 CRISP1P54107 249 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 NXPH1P58417 271 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SNTA1Q13424 505 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 CDC73Q6P1J9 531 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 ZER1Q7Z7L7 766 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 OR4M2Q8NGB6 313 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 OR4N2Q8NGD1 307 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 TRIM63Q969Q1 353 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 MMABQ96EY8 250 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 Q96MT0 163 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 TRNT1Q96Q11 434 aaKnown RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 POLR2J3Q9H1A7 115 aaKnown RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 LYRM4Q9HD34 91 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 WNT16Q9UBV4 365 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 REV1Q9UBZ9 1251 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 RGS5O15539 181 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 AKR7A2O43488 359 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 FOXS1O43638 330 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 ADRA2AP08913 450 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SSTR4P31391 388 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 UQCRC1P31930 480 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 GABRA3P34903 492 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 UGT2B10P36537 528 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 NUDT1P36639 197 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 PGDP52209 483 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 TYW3Q6IPR3 259 aaKnown RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 PTCHD4Q6ZW05 846 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SPEM1Q8N4L4 309 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 COX18Q8N8Q8 333 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 C1orf216Q8TAB5 229 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 OR51E2Q9H255 320 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 DNAJC27Q9NZQ0 273 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 LRIT1Q9P2V4 623 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 FTSJ1Q9UET6 329 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 NUFIP1Q9UHK0 495 aaKnown RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 RNF215Q9Y6U7 377 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 EML5Q05BV3 1969 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 A0A0B4J293 547 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 MEIOCA2RUB1 952 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 CYP7B1O75881 506 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 FASLGP48023 281 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 UGT2B15P54855 530 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 RGS8P57771 180 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 PRICKLE4Q2TBC4 344 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
SHMT2-212ENST00000554467 NKAIN4Q8IVV8 208 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 OR52R1Q8NGF1 315 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SHDQ96IW2 340 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SDF2Q99470 211 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 SPATA5L1Q9BVQ7 753 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 MUTYHQ9UIF7 546 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 DTX4Q9Y2E6 619 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 KLK4Q9Y5K2 254 aa10.86□□□□□ -0.67
SHMT2-212ENST00000554467 ALAS2P22557 587 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 CXCL12P48061 93 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 AP2S1P53680 142 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 FOXL2P58012 376 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 HNRNPKP61978 463 aaKnown RBP eCLIP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZP2Q05996 745 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 MGAT2Q10469 447 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF155Q12901 538 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-212ENST00000554467 DUSP8Q13202 625 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 GNA13Q14344 377 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZMAT1Q5H9K5 638 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 FHL5Q5TD97 284 aa10.85□□□□□ -0.67
SHMT2-212ENST00000554467 ZNF517Q6ZMY9 492 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms