RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RNF130Q86XS8 419 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CDC20BQ86Y33 519 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 OR7G1Q8NGA0 311 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC22A8Q8TCC7 542 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 UTP4Q969X6 686 aaKnown RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CLPTM1LQ96KA5 538 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC35G5Q96KT7 338 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 JSRP1Q96MG2 331 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 MS4A4EQ96PG1 132 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CDRT15Q96T59 188 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC6A15Q9H2J7 730 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 C3orf14Q9HBI5 128 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 SPAG4Q9NPE6 437 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 BOKQ9UMX3 212 aaPredicted RBP12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 USP22Q9UPT9 525 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 DTX4Q9Y2E6 619 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
SPTLC2-202ENST00000554365 PRORSD1PA6NEY8 169 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 SYT5O00445 386 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 DYRK3O43781 588 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 TNFRSF21O75509 655 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 DNAJC8O75937 253 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 KRT75O95678 551 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ACP2P11117 423 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 BMP2P12643 396 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ETFAP13804 333 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 BMP5P22003 454 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 PEX19P40855 299 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 PRKAG1P54619 331 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 EEFSECP57772 596 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 LASP1Q14847 261 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ADRM1Q16186 407 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ZNF791Q3KP31 576 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 FBXW10Q5XX13 1052 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 NET1Q7Z628 596 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 C9orf40Q8IXQ3 194 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ULK2Q8IYT8 1036 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 FBXW8Q8N3Y1 598 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 RELL2Q8NC24 303 aaPredicted RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 FAM13CQ8NE31 585 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 LRRC46Q96FV0 321 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 VSTM2LQ96N03 204 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ZNF583Q96ND8 569 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 OR10A5Q9H207 317 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 FOLH1BQ9HBA9 442 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 EML6Q6ZMW3 1958 aa12.77□□□□□ -0.37
SPTLC2-202ENST00000554365 PRAMEF27A3QJZ7 478 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 A6NNC1 897 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 COQ9O75208 318 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 NUDT7P0C024 238 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 MATN1P21941 496 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 GSK3BP49841 420 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 ASCL1P50553 236 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 LIPEQ05469 1076 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 MAPK11Q15759 364 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 C6orf163Q5TEZ5 329 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 SEM1Q6ZVN7 128 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 SZRD1Q7Z422 152 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 PTOV1Q86YD1 416 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 OR5D16Q8NGK9 328 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 OR10A6Q8NH74 314 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 NEIL3Q8TAT5 605 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 NUBPLQ8TB37 319 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 SPACA9Q96E40 222 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 OTUB1Q96FW1 271 aaPredicted RBP12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 GAL3ST4Q96RP7 486 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 SH3GL1Q99961 368 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 YIPF4Q9BSR8 244 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 THUMPD3Q9BV44 507 aaKnown RBP12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 OR51I1Q9H343 314 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 EQTNQ9NQ60 294 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 ADA2Q9NZK5 511 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 BCAP29Q9UHQ4 241 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 CBLCQ9ULV8 474 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 KCNE3Q9Y6H6 103 aa12.76□□□□□ -0.37
SPTLC2-202ENST00000554365 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 EVPLLA8MZ36 301 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 FAM220BPB1ANY3 271 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 HMGN4O00479 90 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 DVL2O14641 736 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 BCAS2O75934 225 aaPredicted RBP12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 PDE5AO76074 875 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 HSD17B1P14061 328 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 GDF1P27539 372 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 PGM1P36871 562 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 MAGEA8P43361 318 aa12.75□□□□□ -0.37
SPTLC2-202ENST00000554365 ADAM8P78325 824 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms