RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 HPS4Q9NQG7 708 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 SDHAF3Q9NRP4 125 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 INIPQ9NRY2 104 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 AGPAT3Q9NRZ7 376 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 DMAC2Q9NW81 257 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 HPF1Q9NWY4 346 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 THAP10Q9P2Z0 257 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-206ENST00000554005 UBQLN2Q9UHD9 624 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 RNF215Q9Y6U7 377 aa4.28□□□□□ -1.72
FOXN3-206ENST00000554005 UMODL1Q5DID0 1318 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 FER1L5A0AVI2 2057 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 TANC1Q9C0D5 1861 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 IGHV4-30-2A0A087WSY4 118 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 IGKV3D-15A0A087WSY6 115 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 A0A1B0GVG6 124 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ANKRD63C9JTQ0 380 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 E2F3O00716 465 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 OGTO15294 1046 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CLDN3O15551 220 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 PSMD3O43242 534 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SNAP91O60641 907 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 PNPP00491 289 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CHRNA1P02708 482 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CHRNGP07510 517 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 IQCF3P0C7M6 154 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 THEGLP0DJG4 465 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 EZRP15311 586 aaKnown RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 HPGDP15428 266 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 IL32P24001 234 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ADSSP30520 456 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 AXLP30530 894 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 PKLRP30613 574 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SOX6P35712 828 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CCR4P51679 360 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ERVK-16P61578 105 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 MLF2Q15773 248 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 MOGQ16653 247 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 NDUFA5Q16718 116 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 KYAT1Q16773 422 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 UPP1Q16831 310 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 RFTN2Q52LD8 501 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 TAF1BQ53T94 588 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ATF7IP2Q5U623 682 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ARMCX5Q6P1M9 558 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 DOK6Q6PKX4 331 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 APTXQ7Z2E3 356 aaKnown RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ZNF619Q8N2I2 560 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CDC26Q8NHZ8 85 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 C8orf46Q8TAG6 207 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 GANCQ8TET4 914 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 LIPHQ8WWY8 451 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 C11orf52Q96A22 123 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 TSC22D3Q99576 134 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CIB1Q99828 191 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SSX3Q99909 188 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CBWD1Q9BRT8 395 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 CABLES2Q9BTV7 478 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ACAT2Q9BWD1 397 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 PINK1Q9BXM7 581 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 STMN4Q9H169 189 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 C11orf49Q9H6J7 331 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SAMSN1Q9NSI8 373 aaKnown RBP4.27□□□□□ -1.73
FOXN3-206ENST00000554005 AGPAT5Q9NUQ2 364 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 MED17Q9NVC6 651 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 PLEK2Q9NYT0 353 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SH3BGRL2Q9UJC5 107 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 HPCAL4Q9UM19 191 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 ERVK-19Q9WJR5 959 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 OR1A2Q9Y585 309 aa4.27□□□□□ -1.73
FOXN3-206ENST00000554005 SIP14410 1827 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 A0A0J9YWU9 116 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 ZNF233A6NK53 670 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 GOLGA8MH3BSY2 632 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 TRAFD1O14545 582 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 TRDMT1O14717 391 aaKnown RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 KMOO15229 486 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 INPP4BO15327 924 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 B4GALT5O43286 388 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 FAM189A1O60320 539 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 KERAO60938 352 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 ECDO95905 644 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 EPOP01588 193 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 RETP07949 1114 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 CLTAP09496 248 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 RHOXF2BP0C7M4 288 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 MCF2P10911 925 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 B4GALT1P15291 398 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 CTRB1P17538 263 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 ARF4P18085 180 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 CFL1P23528 166 aaKnown RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 CASP4P49662 377 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 VEGFCP49767 419 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 SERPINB8P50452 374 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 ABCE1P61221 599 aaKnown RBP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 POLR2GP62487 172 aaKnown RBP eCLIP4.26□□□□□ -1.73
FOXN3-206ENST00000554005 ARF5P84085 180 aa4.26□□□□□ -1.73
FOXN3-206ENST00000554005 MFGE8Q08431 387 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms