RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 IGHV4-4A0A075B6R2 117 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 A0A087WW49 117 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 SMCO2A6NFE2 343 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TUBAL3A6NHL2 446 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 SRRM4A7MD48 611 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 C2CD4DB7Z1M9 353 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ANHXE9PGG2 379 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 HAS3O00219 553 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 EI24O14681 340 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ARPC1BO15143 372 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 CETN3O15182 167 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 RGS16O15492 202 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 NMT2O60551 498 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TSPAN2O60636 221 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 DUSP11O75319 330 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 SH3BGRLO75368 114 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 STX11O75558 287 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 STK17BO94768 372 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 H6PDO95479 791 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TSPAN12O95859 305 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PGK1P00558 417 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 STAG3L2P0CL84 134 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 POU2F1P14859 743 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 EFNA1P20827 205 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 NT5EP21589 574 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 AADACP22760 399 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TUBG1P23258 451 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 GLRA1P23415 457 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 UCP1P25874 307 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ANXA13P27216 316 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 GIFP27352 417 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CEACAM8P31997 349 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 ATP5C1P36542 298 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 SLC1A4P43007 532 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CDKN1BP46527 198 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 RPS5P46782 204 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 CASP4P49662 377 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CSNK1EP49674 416 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 NDST1P52848 882 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CDH6P55285 790 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PEX3P56589 373 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 NTHL1P78549 312 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CDKL1Q00532 357 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 OTUD4Q01804 1114 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 CDR2Q01850 454 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 RGS1Q08116 209 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PPIL2Q13356 520 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 GANABQ14697 944 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 MEF2DQ14814 521 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 UBE2V2Q15819 145 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CHRNA6Q15825 494 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CDKN3Q16667 212 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ZSWIM7Q19AV6 140 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 KNOP1Q1ED39 458 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 ZNF699Q32M78 642 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 RFTN2Q52LD8 501 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 ATP1A1-AS1Q5TC04 95 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PLCXD3Q63HM9 321 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TWF2Q6IBS0 349 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 TMEM53Q6P2H8 277 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TMEM207Q6UWW9 146 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 VITQ6UXI7 678 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TSEN54Q7Z6J9 526 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 LRRTM1Q86UE6 522 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ITIH5Q86UX2 942 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 C17orf64Q86WR6 236 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CCDC50Q8IVM0 306 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 CCDC65Q8IXS2 484 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 FAM9CQ8IZT9 166 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 SYCE1Q8N0S2 351 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ALLCQ8N6M5 410 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 NFAM1Q8NET5 270 aaPredicted RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 SDR9C7Q8NEX9 313 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 OR5AU1Q8NGC0 362 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 OR51G2Q8NGK0 314 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 OR5M9Q8NGP3 310 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 OR9A1PQ8NGU1 263 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 LILRB4Q8NHJ6 448 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 RPLP0P6Q8NHW5 317 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ZNF596Q8TC21 504 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 SCFD1Q8WVM8 642 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 FAM3CQ92520 227 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 ART4Q93070 314 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 LHX4Q969G2 390 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 C10orf35Q96D05 121 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PELI1Q96FA3 418 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 COQ2Q96H96 371 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PRAC1Q96KF2 57 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 C10orf90Q96M02 699 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 SLC38A2Q96QD8 506 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 FMO2Q99518 471 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 LPAR4Q99677 370 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 PAIP2Q9BPZ3 127 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 TTYH2Q9BSA4 534 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 C20orf24Q9BUV8 137 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TRIM62Q9BVG3 475 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TEKT3Q9BXF9 490 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 TDRD1Q9BXT4 1180 aaKnown RBP1.92□□□□□ -2.1
SRP54-204ENST00000553923 DNTTIP1Q9H147 329 aa1.92□□□□□ -2.1
SRP54-204ENST00000553923 LRRN3Q9H3W5 708 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms