RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IFNB1P01574 187 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 PGK2P07205 417 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 CHRNGP07510 517 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 SLC35E2P0CK97 266 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 HSD17B7P56937 341 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 KLHL30Q0D2K2 578 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 SCGB2A2Q13296 93 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 GIT2Q14161 759 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 BTG3Q14201 252 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 KARSQ15046 597 aaKnown RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ZNF658Q5TYW1 1059 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 FAM219BQ5XKK7 198 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ISLR2Q6UXK2 745 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 LAX1Q8IWV1 398 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 FBXW8Q8N3Y1 598 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ZBTB44Q8NCP5 570 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TMEM185AQ8NFB2 350 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 RNASE8Q8TDE3 154 aaKnown RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 THRSPQ92748 146 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 FAM46BQ96A09 425 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TMEM186Q96B77 213 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 GUCD1Q96NT3 240 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 S1PR3Q99500 378 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 SPAG8Q99932 426 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 C19orf43Q9BQ61 176 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 NUSAP1Q9BXS6 441 aaKnown RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 PRO3102Q9H379 93 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 RNF41Q9H4P4 317 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TMEM231Q9H6L2 316 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 KLRF1Q9NZS2 232 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TMEM9Q9P0T7 183 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ANKMY1Q9P2S6 941 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 ERVK-18Q9QC07 812 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 CHMP2BQ9UQN3 213 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.62□□□□□ -1.99
SCFD1-210ENST00000553693 TEX264Q9Y6I9 313 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 KIF7Q2M1P5 1343 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 CDHR2Q9BYE9 1310 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 AKAP11Q9UKA4 1901 aa2.62□□□□□ -1.99
SCFD1-210ENST00000553693 RANBP2P49792 3224 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 A8MX80 341 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CLDN3O15551 220 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PEX11AO75192 247 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 HMMRO75330 724 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 IDH1O75874 414 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 STBD1O95210 358 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 IGLV1-47P01700 117 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 SERPINF2P08697 491 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 LAMP1P11279 417 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 TNNI3P19429 210 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 MTIF2P46199 727 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CNN1P51911 297 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 SLC7A2P52569 658 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 GABPAQ06546 454 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CKAP4Q07065 602 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CD47Q08722 323 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 HSPA14Q0VDF9 509 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 DPYSQ14117 519 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 P2RY14Q15391 338 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 OR1C1Q15619 314 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 STX1AQ16623 288 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PRAMEF7Q5VXH5 474 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 ARSKQ6UWY0 536 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CWC27Q6UX04 472 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 APOOLQ6UXV4 268 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 UNC5DQ6UXZ4 953 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 DLEU7Q6UYE1 221 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 ADAMTSL2Q86TH1 951 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 STHQ8IWL8 128 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 ELMOD2Q8IZ81 293 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 RNF175Q8N4F7 328 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 Q8N9G6 341 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 SIDT2Q8NBJ9 832 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 OR13F1Q8NGS4 319 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 C14orf79Q96F83 325 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 VSIG2Q96IQ7 327 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PIWIL1Q96J94 861 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 RPGRIP1Q96KN7 1286 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 SAMD8Q96LT4 415 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 IMMP1LQ96LU5 166 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 KIR2DL4Q99706 377 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 EBF4Q9BQW3 602 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 THUMPD2Q9BTF0 503 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CARD6Q9BX69 1037 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 FTHL17Q9BXU8 183 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 CARD9Q9H257 536 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 LIN28AQ9H9Z2 209 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 FARSBQ9NSD9 589 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PNPLA3Q9NST1 481 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PIGVQ9NUD9 493 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 ACOXLQ9NUZ1 547 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 PRODH2Q9UF12 536 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 MRTO4Q9UKD2 239 aaKnown RBP2.61□□□□□ -1.99
SCFD1-210ENST00000553693 DNPEPQ9ULA0 475 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 SNX6Q9UNH7 406 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 UBN2Q6ZU65 1347 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 BRCA2P51587 3418 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 RTL9Q8NET4 1388 aa2.61□□□□□ -1.99
SCFD1-210ENST00000553693 RIC1Q4ADV7 1423 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms