RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ZNF223Q9UK11 482 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ING4Q9UNL4 249 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 CCL26Q9Y258 94 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NCKAP1Q9Y2A7 1128 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 YARS2Q9Y2Z4 477 aaKnown RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NPTNQ9Y639 398 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 NUP214P35658 2090 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 IGKV1-8A0A0C4DH67 115 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 A0A0G2JK05 382 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 A0A0X1KG70 313 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TRAPPC13A5PLN9 417 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 OR5K3A6NET4 321 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 NAP1L6A6NFF2 107 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 A6NL46 340 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 K7ESM1 405 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RTCAO00442 366 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 BHLHE40O14503 412 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 LRRTM2O43300 516 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 OR1F1O43749 312 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PRICKLE3O43900 615 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PQBP1O60828 265 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 STX11O75558 287 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GATBO75879 557 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RCBTB2O95199 551 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AIFM1O95831 613 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RHOP08100 348 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SULT1A3P0DMM9 295 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SULT1A4P0DMN0 295 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ADH5P11766 374 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GNSP15586 552 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ELK1P19419 428 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 C4BPBP20851 252 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PAICSP22234 425 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AHCYP23526 432 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SSTR4P31391 388 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SOX18P35713 384 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MNDAP41218 407 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 BUD31P41223 144 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RBM34P42696 430 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AVPR1BP47901 424 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 DGKEP52429 567 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CTBP2P56545 445 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PER3P56645 1201 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SCAND1P57086 179 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 STXBP1P61764 594 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ACTA2P62736 377 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ACTG2P63267 376 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 EEF1A1P68104 462 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MRPS10P82664 201 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CDK3Q00526 305 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 DHODHQ02127 395 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RPL6Q02878 288 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 HSF2Q03933 536 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RGS1Q08116 209 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TSTA3Q13630 321 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GGTLC2Q14390 218 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 LASP1Q14847 261 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 DHCR24Q15392 516 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TEAD2Q15562 447 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZSWIM7Q19AV6 140 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF791Q3KP31 576 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ARHGAP11BQ3KRB8 267 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ELFN2Q5R3F8 820 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM69AQ5T7M9 428 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GARNL3Q5VVW2 1013 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZNF425Q6IV72 752 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MFSD12Q6NUT3 480 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ANKRD54Q6NXT1 300 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC30A6Q6NXT4 461 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SFXN4Q6P4A7 337 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ZCCHC12Q6PEW1 402 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SEZ6L2Q6UXD5 910 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 FRRS1Q6ZNA5 592 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TMPRSS11FQ6ZWK6 438 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 BTN2A1Q7KYR7 527 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 C16orf62Q7Z3J2 963 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 TMCO2Q7Z6W1 182 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 RANBP3LQ86VV4 465 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 NRROSQ86YC3 692 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 OR2L13Q8N349 312 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CADM2Q8N3J6 435 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SIRT6Q8N6T7 355 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 LINC01555Q8NAE3 123 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 POMGNT2Q8NAT1 580 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 FAM98AQ8NCA5 519 aaKnown RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SLC37A3Q8NCC5 494 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 OR52L1Q8NGH7 329 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 OR2A1Q8NGT9 310 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 FANK1Q8TC84 345 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 CYB5D2Q8WUJ1 264 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 SPRYD4Q8WW59 207 aaPredicted RBP4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 AUTS2Q8WXX7 1259 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GAL3ST3Q96A11 431 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 ELP4Q96EB1 424 aa4.89□□□□□ -1.63
TMEM55B-204ENST00000553602 GIMAP5Q96F15 307 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms