RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 FLYWCH1Q4VC44 716 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 SPANXN4Q5MJ08 99 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 MAVSQ7Z434 540 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 P4HA3Q7Z4N8 544 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 STARD4Q96DR4 205 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 PGM2Q96G03 612 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 ACTRT3Q9BYD9 372 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-206ENST00000553529 PIGUQ9H490 435 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 SDHAF3Q9NRP4 125 aa16.39■□□□□ 0.21
SHMT2-206ENST00000553529 NOP53Q9NZM5 478 aaKnown RBP16.39■□□□□ 0.21
SHMT2-206ENST00000553529 EIF1AYO14602 144 aaKnown RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 CPSF4O95639 269 aaKnown RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 CCKARP32238 428 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 OPRM1P35372 400 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 KIR2DL2P43627 348 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 CLK3P49761 638 aaKnown RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 MAGOHP61326 146 aaKnown RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 UFM1P61960 85 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 FAM27E3Q08E93 113 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 VPS26BQ4G0F5 336 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 ZNF474Q6S9Z5 364 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 C22orf34Q6ZV56 151 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 ZNF614Q8N883 585 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 OR4A15Q8NGL6 344 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 RAB8BQ92930 207 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 STACQ99469 402 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 TM9SF2Q99805 663 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 POLDIP3Q9BY77 421 aaKnown RBP16.38■□□□□ 0.21
SHMT2-206ENST00000553529 PTGES2Q9H7Z7 377 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 ASIC5Q9NY37 505 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 HAO1Q9UJM8 370 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 CARD8Q9Y2G2 431 aa16.38■□□□□ 0.21
SHMT2-206ENST00000553529 A0A0J9YW62 118 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 RNF103-CHMP3A0A140T963 221 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 A6NNC1 897 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 TNFSF11O14788 317 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 FCMRO60667 390 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 NTN1O95631 604 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 IL18BPO95998 194 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 MYZAPP0CAP1 466 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 KLK2P20151 261 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 EIF1AXP47813 144 aaKnown RBP16.37■□□□□ 0.21
SHMT2-206ENST00000553529 CPA2P48052 419 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 IST1P53990 364 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 FUT5Q11128 374 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 GANABQ14697 944 aaKnown RBP16.37■□□□□ 0.21
SHMT2-206ENST00000553529 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-206ENST00000553529 C6orf120Q7Z4R8 191 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 CAMKMTQ7Z624 323 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 CDC20BQ86Y33 519 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 MEIOBQ8N635 442 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 OR56A1Q8NGH5 318 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 PHOSPHO1Q8TCT1 267 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 ADAMTS15Q8TE58 950 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 ADGRG7Q96K78 797 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 PIGQQ9BRB3 760 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 INPP5KQ9BT40 448 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 SFXN3Q9BWM7 321 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 CLEC4MQ9H2X3 399 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-206ENST00000553529 MEAF6Q9HAF1 191 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 UBQLN4Q9NRR5 601 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 DUSP22Q9NRW4 184 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 RASSF1Q9NS23 344 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 PLEKHA6Q9Y2H5 1048 aa16.37■□□□□ 0.21
SHMT2-206ENST00000553529 PRAMEF27A3QJZ7 478 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 FAM221AA4D161 298 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 TUBAL3A6NHL2 446 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 TTC36A6NLP5 189 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 NPIPB9F8W1W9 429 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 SCDO00767 359 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 SIAH2O43255 324 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 CXCL13O43927 109 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 NGFRP08138 427 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 LINGO3P0C6S8 592 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 EPHA3P29320 983 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 RPL3P39023 403 aaKnown RBP16.36■□□□□ 0.21
SHMT2-206ENST00000553529 CDKN2CP42773 168 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 C21orf58P58505 322 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 SF3B4Q15427 424 aaKnown RBP eCLIP16.36■□□□□ 0.217e-19■■■■□ 22
SHMT2-206ENST00000553529 BCL2A1Q16548 175 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 KLHL26Q53HC5 615 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 HHATQ5VTY9 493 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 TNFAIP8L2Q6P589 184 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-206ENST00000553529 ZCCHC12Q6PEW1 402 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 METTL25Q8N6Q8 603 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 ATP6V1C2Q8NEY4 427 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 OR10D3Q8NH80 312 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 B4GALNT2Q8NHY0 566 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 SFXN5Q8TD22 340 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 ARL8AQ96BM9 186 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 DPY30Q9C005 99 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 OR51I1Q9H343 314 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 CCM2LQ9NUG4 571 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-206ENST00000553529 ATAD3AQ9NVI7 634 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 PACSIN3Q9UKS6 424 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 FAF1Q9UNN5 650 aaPredicted RBP16.36■□□□□ 0.21
SHMT2-206ENST00000553529 ACTL7BQ9Y614 415 aa16.36■□□□□ 0.21
SHMT2-206ENST00000553529 CELSR1Q9NYQ6 3014 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms