RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 KCNK2O95069 426 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 HMGN1P05114 100 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 CDK1P06493 297 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 HBQ1P09105 142 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 GIMD1P0DJR0 217 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 TDGF1P13385 188 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 DRD5P21918 477 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ACVR2AP27037 513 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 EPHA2P29317 976 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 FMO3P31513 532 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 GABRA3P34903 492 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 GSSP48637 474 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 DHPSP49366 369 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 EMDP50402 254 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 DUSP3P51452 185 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 GFERP55789 205 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 OR1D5P58170 312 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 CDK5Q00535 292 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 NCF4Q15080 339 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SEC23BQ15437 767 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ELAVL1Q15717 326 aaKnown RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF141Q15928 474 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 FLYWCH1Q4VC44 716 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SLC27A4Q6P1M0 643 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF730Q6ZMV8 503 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF836Q6ZNA1 936 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 Q7L0L9 218 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 KANSL1Q7Z3B3 1105 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 CDK20Q8IZL9 346 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 LSMEM1Q8N8F7 131 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 MAFAQ8NHW3 353 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 WDR36Q8NI36 951 aaKnown RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 TEX47Q8TBZ9 253 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SAP25Q8TEE9 199 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 FAR1Q8WVX9 515 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 EDAQ92838 391 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 RFKQ969G6 155 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 TMIGD2Q96BF3 282 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 C12orf43Q96C57 262 aaKnown RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SLC41A3Q96GZ6 507 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 PEX11GQ96HA9 241 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 COG8Q96MW5 612 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 RSPO3Q9BXY4 272 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 TGIF2Q9GZN2 237 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 LHPPQ9H008 270 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 TMEM27Q9HBJ8 222 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 MKKSQ9NPJ1 570 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ACOT13Q9NPJ3 140 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 NECTIN3Q9NQS3 549 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 RASSF1Q9NS23 344 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 PAK1IP1Q9NWT1 392 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF226Q9NYT6 803 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 HCN3Q9P1Z3 774 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 RHCGQ9UBD6 479 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 ENPP5Q9UJA9 477 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 SLC35A3Q9Y2D2 325 aa6.77□□□□□ -1.33
ATXN3-221ENST00000553498 A0A087WUU8 490 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 IGKV3D-11A0A0A0MRZ8 115 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 EFCAB7A8K855 629 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 NPIPB9F8W1W9 429 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 KLF4O43474 513 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GABARAPO95166 117 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ONECUT2O95948 504 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 IGF2P01344 180 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CT62P0C5K7 136 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 POU2F1P14859 743 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TNNI3P19429 210 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 FBLP22087 321 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 MMP11P24347 488 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 POU1F1P28069 291 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 RORAP35398 523 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 PPICP45877 212 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 SLC15A1P46059 708 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 OMPP47874 163 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GIPRP48546 466 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 PCYT1AP49585 367 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF136P52737 540 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ATP12AP54707 1039 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CTBP2P56545 445 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TUBA1BP68363 451 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 EFNB1P98172 346 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 PSG6Q00889 435 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ID2Q02363 134 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TMED1Q13445 227 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 SHBQ15464 509 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GPR68Q15743 365 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TIMM50Q3ZCQ8 353 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 KLHL22Q53GT1 634 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 MRPL2Q5T653 305 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 MFSD4BQ5TF39 518 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
ATXN3-221ENST00000553498 TUBA1AQ71U36 451 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 ZNF367Q7RTV3 350 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 GDF7Q7Z4P5 450 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 COMTD1Q86VU5 262 aa6.76□□□□□ -1.33
ATXN3-221ENST00000553498 CLIP4Q8N3C7 705 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms