RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CRACR2AQ9BSW2 395 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 DPH7Q9BTV6 452 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ZSCAN5AQ9BUG6 496 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 DUSP16Q9BY84 665 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ELOVL4Q9GZR5 314 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 POLR1EQ9GZS1 481 aaKnown RBP3.89□□□□□ -1.79
SYNE2-210ENST00000553455 ELOVL3Q9HB03 270 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 XPO7Q9UIA9 1087 aaKnown RBP3.89□□□□□ -1.79
SYNE2-210ENST00000553455 NAALAD2Q9Y3Q0 740 aa3.89□□□□□ -1.79
SYNE2-210ENST00000553455 OR6C65A6NJZ3 312 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 H0YCG3 227 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 K7EQM0 130 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 GPAA1O43292 621 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SPAG6O75602 509 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SCRG1O75711 98 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 THY1P04216 161 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 PRG2P13727 222 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 RGS19P49795 217 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 HNMTP50135 292 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SLC25A1P53007 311 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 VLDLRP98155 873 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 KCNJ11Q14654 390 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 TATDN3Q17R31 274 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SLC5A12Q1EHB4 618 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 GLYR1Q49A26 553 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-210ENST00000553455 PAMR1Q6UXH9 720 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 PPP1R42Q7Z4L9 355 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 TBC1D21Q8IYX1 336 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 FAM133AQ8N9E0 248 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 OR52M1Q8NGK5 317 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 RHOXF1Q8NHV9 184 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 CCDC26Q8TAB7 109 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 ANKRD9Q96BM1 317 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-210ENST00000553455 TTC25Q96NG3 672 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 ZNF607Q96SK3 696 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SLC6A7Q99884 636 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 RPS10P5Q9NQ39 176 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 GNG12Q9UBI6 72 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 ZNF107Q9UII5 783 aaPredicted RBP3.88□□□□□ -1.79
SYNE2-210ENST00000553455 SNX6Q9UNH7 406 aa3.88□□□□□ -1.79
SYNE2-210ENST00000553455 CFAP65Q6ZU64 1925 aaKnown RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 IGKV3D-20A0A0C4DH25 116 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 MBLAC1A4D2B0 266 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 K7ENP7 123 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 NUDT21O43809 227 aaKnown RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 CA1P00915 261 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 UGT2B4P06133 528 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 PGCP20142 388 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 CHI3L1P36222 383 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 MDH2P40926 338 aaKnown RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 PPT1P50897 306 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 SERTAD2Q14140 314 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 LAGE3Q14657 143 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 TPD52L1Q16890 204 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 GGTA1PQ4G0N0 100 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 TTC23Q5W5X9 447 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 SLC22A10Q63ZE4 541 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 FBXL22Q6P050 247 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 VASH2Q86V25 355 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 ABCA7Q8IZY2 2146 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 GPR137CQ8N3F9 429 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 OR5L2Q8NGL0 311 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 VSIG2Q96IQ7 327 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 SENP8Q96LD8 212 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 C12orf66Q96MD2 445 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 SIGLEC12Q96PQ1 595 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 RIT2Q99578 217 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 WRAP73Q9P2S5 460 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 DPM3Q9P2X0 92 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 SAMD4AQ9UPU9 718 aaKnown RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 MRPS33Q9Y291 106 aaKnown RBP3.87□□□□□ -1.79
SYNE2-210ENST00000553455 MAB21L2Q9Y586 359 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 KDRP35968 1356 aa3.87□□□□□ -1.79
SYNE2-210ENST00000553455 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 E9PLD3 99 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 H3BMQ9 156 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 BTN3A3O00478 584 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 GMFGO60234 142 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 KIAA0754O94854 1291 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 ADCY5O95622 1261 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 GDF1P27539 372 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 NF2P35240 595 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 HPCAL1P37235 193 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 STARP49675 285 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 CBX1P83916 185 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 CSTF1Q05048 431 aaKnown RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 RIPPLY1Q0D2K3 151 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 ASAH1Q13510 395 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 SYPL1Q16563 259 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 KRTAP27-1Q3LI81 207 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 UTF1Q5T230 341 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 ATAD3BQ5T9A4 648 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 WSCD1Q658N2 575 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 FAM71F2Q6NXP2 309 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 FAHD2BQ6P2I3 314 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-210ENST00000553455 BAIAP2L2Q6UXY1 529 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 MRAPQ8TCY5 172 aa3.86□□□□□ -1.79
SYNE2-210ENST00000553455 TRUB1Q8WWH5 349 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms