RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CLDN9O95484 217 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 SP1P08047 785 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 CDK4P11802 303 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 SELEP16581 610 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 CASP14P31944 242 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 RPL4P36578 427 aaKnown RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 ATP1B3P54709 279 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 OGDHQ02218 1023 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 XKR7Q5GH72 579 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 FAM72AQ5TYM5 149 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 FAM72DQ6L9T8 149 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 RNASEKQ6P5S7 137 aaKnown RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 TMEM107Q6UX40 140 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 Q6ZRP5 223 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 H2BFWTQ7Z2G1 175 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 FAM72BQ86X60 149 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 CCDC71Q8IV32 467 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 ALLCQ8N6M5 410 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 ZNRF1Q8ND25 227 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 FAM81AQ8TBF8 368 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 ST8SIA1Q92185 356 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 BADQ92934 168 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 C11orf24Q96F05 449 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 RBM4Q9BWF3 364 aaKnown RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 MOB1AQ9H8S9 216 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 KLHL28Q9NXS3 571 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 KCNG2Q9UJ96 466 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 RARRES3Q9UL19 164 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 BARX2Q9UMQ3 279 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-208ENST00000553278 FBXO7Q9Y3I1 522 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 OARD1Q9Y530 152 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 MYH15Q9Y2K3 1946 aa4.83□□□□□ -1.64
SCFD1-208ENST00000553278 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 F5H6K3 240 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 LMX1BO60663 402 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 CLDN1O95832 211 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 CRYGBP07316 175 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 RALBP11234 206 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 TNNI1P19237 187 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 NMT1P30419 496 aaKnown RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 UGT1A5P35504 534 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 TIMP3P35625 211 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ENPEPQ07075 957 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 KLRC3Q07444 240 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 BST2Q10589 180 aaKnown RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ZIC1Q15915 447 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 SLC5A12Q1EHB4 618 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF718Q3SXZ3 478 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF585BQ52M93 769 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ACER2Q5QJU3 275 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 STPG1Q5TH74 334 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 FAHD2BQ6P2I3 314 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 DHDDSQ86SQ9 333 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 CARM1Q86X55 608 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 BPIFB2Q8N4F0 458 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 C15orf54Q8N8G6 183 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ZNF519Q8TB69 540 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 IL1F10Q8WWZ1 152 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 WBP1Q96G27 269 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 FAHD2AQ96GK7 314 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 PRICKLE1Q96MT3 831 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 CENPKQ9BS16 269 aa4.82□□□□□ -1.64
SCFD1-208ENST00000553278 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
SCFD1-208ENST00000553278 ERICH4A6NGS2 130 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 C9JVG2 144 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SPECC1L-ADORA2AF8WAN1 911 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 HAS3O00219 553 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 BMPR1BO00238 502 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 TFECO14948 347 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-208ENST00000553278 INSIG1O15503 277 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 DFNA5O60443 496 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 KRT6AP02538 564 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SNHG28P0DPA3 235 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 MCF2P10911 925 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 ETS2P15036 469 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 GNB3P16520 340 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SDC1P18827 310 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 MAGEA1P43355 309 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 GYG1P46976 350 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 POU3F4P49335 361 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 MFAP2P55001 183 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SRPXP78539 464 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 RAB40BQ12829 278 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 TP53I3Q53FA7 332 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 LINC00242Q5T6M2 205 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 STAC2Q6ZMT1 411 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 SLC35F2Q8IXU6 374 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 COMMD1Q8N668 190 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 BEST4Q8NFU0 473 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 OR5L2Q8NGL0 311 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 DNAJA4Q8WW22 397 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-208ENST00000553278 TMEM190Q8WZ59 177 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 NABP1Q96AH0 204 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 EFHD2Q96C19 240 aaPredicted RBP4.81□□□□□ -1.64
SCFD1-208ENST00000553278 ATXN7L3BQ96GX2 97 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 HSD17B14Q9BPX1 270 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 BCL7BQ9BQE9 202 aa4.81□□□□□ -1.64
SCFD1-208ENST00000553278 WDR13Q9H1Z4 485 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms