RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MRPS22P82650 360 aaKnown RBP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PDE7AQ13946 482 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 FGFBP1Q14512 234 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PTGR1Q14914 329 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 GUSBP1Q15486 140 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PRSS53Q2L4Q9 553 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CHMP1BQ7LBR1 199 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 YTHDF3Q7Z739 585 aaKnown RBP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 FAM9CQ8IZT9 166 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 MEIOBQ8N635 442 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 ARFGAP2Q8N6H7 521 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CNEP1R1Q8N9A8 125 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 OR9A2Q8NGT5 310 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CKAP2Q8WWK9 683 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 IGFBPL1Q8WX77 278 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PIK3IP1Q96FE7 263 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 MAGEB18Q96M61 343 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 Q96MF0 132 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CCL19Q99731 98 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 MED18Q9BUE0 208 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 GSX2Q9BZM3 304 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 ANKRA2Q9H9E1 313 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 ASIC5Q9NY37 505 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF175Q9Y473 711 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 NUP214P35658 2090 aaPredicted RBP10.67□□□□□ -0.7
CKAP4-202ENST00000552828 CSPG4Q6UVK1 2322 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 ARID1AO14497 2285 aa10.67□□□□□ -0.7
CKAP4-202ENST00000552828 C17orf51A8MQB3 221 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 KIAA1324LA8MWY0 1029 aaPredicted RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 SDHDO14521 159 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 SCAMP2O15127 329 aaKnown RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 PDPK1O15530 556 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 FADS1O60427 444 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 NME6O75414 186 aaPredicted RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 SLITRK5O94991 958 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 POU2F1P14859 743 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 IL12BP29460 328 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 EVI2BP34910 448 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 KRT20P35900 424 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 SUCLG1P53597 346 aaKnown RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 GANABQ14697 944 aaKnown RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 CPTPQ5TA50 214 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ANKRD26P1Q6NSI1 321 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 NATD1Q8N6N6 113 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 OR2M3Q8NG83 312 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 OR4K17Q8NGC6 315 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 OR4N2Q8NGD1 307 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ZFP28Q8NHY6 868 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 FIG4Q92562 907 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 KAT2AQ92830 837 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF845Q96IR2 970 aaPredicted RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 AMDHD1Q96NU7 426 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 HS3ST6Q96QI5 342 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 MDFIQ99750 246 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 OPN3Q9H1Y3 402 aaPredicted RBP10.66□□□□□ -0.7
CKAP4-202ENST00000552828 DSN1Q9H410 356 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 GLIPR2Q9H4G4 154 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 FOLH1BQ9HBA9 442 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 SLCO1B3Q9NPD5 702 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 TAS2R9Q9NYW1 312 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ATP6V1HQ9UI12 483 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ABCG2Q9UNQ0 655 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 ZNF337Q9Y3M9 751 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
CKAP4-202ENST00000552828 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 GOLGA8QA0A0J9YX86 632 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 GOLGA8OA6NCC3 632 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 GOLGA8NF8WBI6 632 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 H0YC42 278 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 EPHA3P29320 983 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 MANFP55145 182 aaKnown RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 TPD52P55327 224 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 CLDN8P56748 225 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 PSG6Q00889 435 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 GLYR1Q49A26 553 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 CYP27C1Q4G0S4 372 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 NXNQ6DKJ4 435 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 OGFOD2Q6N063 350 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 SPATA19Q7Z5L4 167 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 SLC44A2Q8IWA5 706 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 KRTCAP2Q8N6L1 136 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 OR7G2Q8NG99 324 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 ACTRT2Q8TDY3 377 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 CIDECQ96AQ7 238 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 EFHD2Q96C19 240 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 ZBED6CLQ96FA7 236 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 DPY30Q9C005 99 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 UBTD1Q9HAC8 227 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 SDHAF3Q9NRP4 125 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 ACSS1Q9NUB1 689 aaPredicted RBP10.65□□□□□ -0.7
CKAP4-202ENST00000552828 ATAD3AQ9NVI7 634 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 PPP4R1LQ9P1A2 415 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 USH1CQ9Y6N9 552 aa10.65□□□□□ -0.7
CKAP4-202ENST00000552828 ANK3Q12955 4377 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms