RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	ZNF223	Q9UK11	482 aa	Predicted RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	NDRG4	Q9ULP0	352 aa	Known RBP	11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	SLC35A3	Q9Y2D2	325 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	NTNG1	Q9Y2I2	539 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	GMPPB	Q9Y5P6	360 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480	HSPE1-MOB4	S4R3N1	261 aa		11.7	□□□□□ -0.54
CACNB3-223	ENST00000552480		A0A087WUU8	490 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	LOC102723996	A0A087X1L8	192 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	TEX51	A0A1B0GUA7	166 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	PLD2	O14939	933 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	PRKN	O60260	465 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	TSPAN2	O60636	221 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	REM1	O75628	298 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	SEC24D	O94855	1032 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	UTS2	O95399	124 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	THY1	P04216	161 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	HTR2A	P28223	471 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	IL12B	P29460	328 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	IFNGR2	P38484	337 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	ADH7	P40394	386 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	NUP107	P57740	925 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	SLC26A5	P58743	744 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	RAPSN	Q13702	412 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR1Q1	Q15612	314 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	KCTD21	Q4G0X4	260 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	HES3	Q5TGS1	186 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	STPG1	Q5TH74	334 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	FNDC7	Q5VTL7	733 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	KLHL17	Q6TDP4	642 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	C6orf15	Q6UXA7	325 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	CD300LD	Q6UXZ3	194 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	HSDL2	Q6YN16	418 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	ZNF440	Q8IYI8	595 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	ZNF786	Q8N393	782 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR2Y1	Q8NGV0	311 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR4C3	Q8NH37	302 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR8K3	Q8NH51	312 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	NUBPL	Q8TB37	319 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	HRASLS5	Q96KN8	279 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	APOL4	Q9BPW4	351 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	MESP1	Q9BRJ9	268 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	NRSN2	Q9GZP1	204 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	ING2	Q9H160	280 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	FAM86C1	Q9NVL1	165 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	PTRH2	Q9Y3E5	179 aa	Known RBP	11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	PCDHGA3	Q9Y5H0	932 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	CCDC88C	Q9P219	2028 aa		11.69	□□□□□ -0.54
CACNB3-223	ENST00000552480	PMS2P1	A4D2B8	440 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	SCD	O00767	359 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ABCB7	O75027	752 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	KLF7	O75840	302 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	LYPD3	O95274	346 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	CSTA	P01040	98 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	IGHE	P01854	428 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	UMOD	P07911	640 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	NGFR	P08138	427 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	RAB40AL	P0C0E4	278 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	SMIM18	P0DKX4	95 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	OSM	P13725	252 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	POU2F1	P14859	743 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	TBXA2R	P21731	343 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	GGT2	P36268	569 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	FOLR3	P41439	243 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ACAA2	P42765	397 aa	Known RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	PNLIPRP2	P54317	469 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	NRG3	P56975	720 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ISL1	P61371	349 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ESRRG	P62508	458 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	RPP38	P78345	283 aa	Known RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	COX10	Q12887	443 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	PCOLCE	Q15113	449 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	C1orf94	Q6P1W5	598 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ZNF613	Q6PF04	617 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	DHRS13	Q6UX07	377 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ISLR2	Q6UXK2	745 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ZNF730	Q6ZMV8	503 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	PRR22	Q8IZ63	422 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	FAM71C	Q8NEG0	241 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	OR5L2	Q8NGL0	311 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	WDR36	Q8NI36	951 aa	Known RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	PIGX	Q8TBF5	258 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	GNPDA2	Q8TDQ7	276 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	FBLIM1	Q8WUP2	373 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	C8orf44	Q96CB5	159 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	OMA1	Q96E52	524 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	ADO	Q96SZ5	270 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	MRPS26	Q9BYN8	205 aa	Known RBP	11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	TRIM2	Q9C040	744 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	TMEM27	Q9HBJ8	222 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	FLRT3	Q9NZU0	649 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	REV1	Q9UBZ9	1251 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	SLC7A7	Q9UM01	511 aa		11.68	□□□□□ -0.54
CACNB3-223	ENST00000552480	LAMA1	P25391	3075 aa		11.67	□□□□□ -0.54
CACNB3-223	ENST00000552480	TRBV11-1	A0A0K0K1C0	115 aa		11.67	□□□□□ -0.54
CACNB3-223	ENST00000552480		A0A1W2PQD3	144 aa		11.67	□□□□□ -0.54
CACNB3-223	ENST00000552480	CDC14C	A4D256	554 aa		11.67	□□□□□ -0.54
CACNB3-223	ENST00000552480	C9orf172	C9J069	976 aa		11.67	□□□□□ -0.54
CACNB3-223	ENST00000552480	ICOSLG	O75144	302 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms