RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TMEM30BQ3MIR4 351 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 BCL7AQ4VC05 210 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 MS4A13Q5J8X5 152 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 PDZK1Q5T2W1 519 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 ARMC12Q5T9G4 340 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 PRAMEF20Q5VT98 475 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 BSPRYQ5W0U4 402 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 PVRIGQ6DKI7 326 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 FAHD2BQ6P2I3 314 aaPredicted RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 RFWD3Q6PCD5 774 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 ZNF614Q8N883 585 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 C15orf54Q8N8G6 183 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 MFSD9Q8NBP5 474 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 CRYGNQ8WXF5 182 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 GTF3AQ92664 365 aaKnown RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 FAHD2AQ96GK7 314 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 NAF1Q96HR8 494 aaKnown RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 AGAP3Q96P47 875 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 CITED1Q99966 193 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 GLIPR2Q9H4G4 154 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 VCPKMTQ9H867 229 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC17A5Q9NRA2 495 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 FAM120CQ9NX05 1096 aaKnown RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 IL36GQ9NZH8 169 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 WRAP73Q9P2S5 460 aaPredicted RBP3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 THEGQ9P2T0 379 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 SUN2Q9UH99 717 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 IFT52Q9Y366 437 aa3.29□□□□□ -1.88
LSM6P2-201ENST00000552208 WDR19Q8NEZ3 1342 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 TEX48A0A1B0GUV7 120 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 OR6C65A6NJZ3 312 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 TMEM110-MUSTN1A8MSY1 372 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CASQ2O14958 399 aaPredicted RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 HPP00738 406 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CRYGBP07316 175 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 FGF4P08620 206 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CYP2B6P20813 491 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 PPP2R1BP30154 601 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC1A4P43007 532 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 GSK3BP49841 420 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 ZNF154Q13106 437 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 PLD1Q13393 1074 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 LAGE3Q14657 143 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 FASTKD3Q14CZ7 662 aaKnown RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 KRTAP24-1Q3LI83 254 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC25A52Q3SY17 297 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 LIPNQ5VXI9 398 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SCYL2Q6P3W7 929 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 DOK6Q6PKX4 331 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 PAQR6Q6TCH4 344 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 APTXQ7Z2E3 356 aaKnown RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 TRIM69Q86WT6 500 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 ECHDC2Q86YB7 292 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 PHC2Q8IXK0 858 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 ALLCQ8N6M5 410 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CATSPER1Q8NEC5 780 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 OR51G2Q8NGK0 314 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 OR5L2Q8NGL0 311 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SDSLQ96GA7 329 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 RPRD1AQ96P16 312 aaPredicted RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 SLC38A2Q96QD8 506 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 NIPSNAP3BQ9BS92 247 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CRLF2Q9HC73 371 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 RCOR3Q9P2K3 495 aaPredicted RBP3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 PISDQ9UG56 409 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 MGAT4AQ9UM21 535 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 OARD1Q9Y530 152 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 CPQQ9Y646 472 aa3.28□□□□□ -1.88
LSM6P2-201ENST00000552208 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 A0A1B0GVL5 298 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 H0YIV9 168 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 SOCS3O14543 225 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 AGTP01019 485 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 PABPC4LP0CB38 370 aaKnown RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 HSD17B1P14061 328 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 SDC1P18827 310 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 CD80P33681 288 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 SPRP35270 261 aaPredicted RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 OR1D4P47884 311 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ATP4BP51164 291 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 RIDAP52758 137 aaKnown RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 RPS8P62241 208 aaKnown RBP3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 KLRB1Q12918 225 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 RCN1Q15293 331 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 NDUFA9Q16795 377 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 PPP1R3AQ16821 1122 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 ZFP69Q49AA0 526 aa3.27□□□□□ -1.89
LSM6P2-201ENST00000552208 TP53I3Q53FA7 332 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms