RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SOD3P08294 240 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 INHBAP08476 426 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RBP1P09455 135 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RHOXF2BP0C7M4 288 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 COL6A2P12110 1019 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 IMPDH2P12268 514 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 TBXA2RP21731 343 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 CHMP24386 653 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 HMOX2P30519 316 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SFTPDP35247 375 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 GCKP35557 465 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 ACVR1BP36896 505 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PEX19P40855 299 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 DSCR4P56555 118 aaPredicted RBP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PPP2R2BQ00005 443 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 HSPB3Q12988 150 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SNTA1Q13424 505 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SF3B4Q15427 424 aaKnown RBP eCLIP6.11□□□□□ -1.431e-8■■■■■ 43.8
PRPF40B-214ENST00000551320 ERCC6LQ2NKX8 1250 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF678Q5SXM1 525 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 GPRIN3Q6ZVF9 776 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PLEKHM3Q6ZWE6 761 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 CXXC5Q7LFL8 322 aaKnown RBP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SZRD1Q7Z422 152 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 GSPT2Q8IYD1 628 aaKnown RBP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 FAM9CQ8IZT9 166 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 CCNYL1Q8N7R7 359 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 OR4C3Q8NH37 302 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 OR10D3Q8NH80 312 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 POC1BQ8TC44 478 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RNF138Q8WVD3 245 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 AKAP1Q92667 903 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 ZBTB9Q96C00 473 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 C1GALT1C1Q96EU7 318 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RNF145Q96MT1 663 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 FAIM2Q9BWQ8 316 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SRXN1Q9BYN0 137 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PRRG4Q9BZD6 226 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 GLIPR2Q9H4G4 154 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 RNF122Q9H9V4 155 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 GIN1Q9NXP7 522 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PSD3Q9NYI0 1048 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF226Q9NYT6 803 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 PRODH2Q9UF12 536 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 BAIAP2L1Q9UHR4 511 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 ADAM29Q9UKF5 820 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 SNX6Q9UNH7 406 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 CR1P17927 2039 aa6.11□□□□□ -1.43
PRPF40B-214ENST00000551320 UQCRHLA0A096LP55 91 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 A0A0J9YW62 118 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 A0A1W2PPM1 405 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 A0A1W2PR80 420 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 MYO1GB0I1T2 1018 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 STX16-NPEPL1H3BU86 382 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 STX16O14662 325 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 EMC8O43402 210 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ULK1O75385 1050 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ANGPTL1O95841 491 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 PLGP00747 810 aaPredicted RBP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ACP2P11117 423 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ECHS1P30084 290 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 TIA1P31483 386 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ARFIP1P53367 373 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 PNLIPRP2P54317 469 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ACSM2AQ08AH3 577 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 CSTF3Q12996 717 aaKnown RBP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 CDK5R2Q13319 367 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 NAB1Q13506 487 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 VEZF1Q14119 521 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 EFR3AQ14156 821 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 GUSBP1Q15486 140 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 CD226Q15762 336 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 TOMM34Q15785 309 aaPredicted RBP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 GGTA1PQ4G0N0 100 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ACSM2BQ68CK6 577 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 CLEC6AQ6EIG7 209 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 C8orf74Q6P047 294 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 TMEM81Q6P7N7 255 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 FAM214BQ7L5A3 538 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 HMGN2P46Q86SG4 172 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 PHC2Q8IXK0 858 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 KBTBD8Q8NFY9 601 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ZNF675Q8TD23 568 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ABHD3Q8WU67 409 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 IGFBPL1Q8WX77 278 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 PIGTQ969N2 578 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 S100PBPQ96BU1 408 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 AMDHD1Q96NU7 426 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 MRPL57Q9BQC6 102 aaKnown RBP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 BDH2Q9BUT1 245 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 ACTR6Q9GZN1 396 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 RAB17Q9H0T7 212 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 MRPL46Q9H2W6 279 aaKnown RBP6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
PRPF40B-214ENST00000551320 MID1IP1Q9NPA3 183 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms