RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 C17orf62Q9BQA9 187 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 HAUS8Q9BT25 410 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PCBD2Q9H0N5 130 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 CCDC68Q9H2F9 335 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ANKZF1Q9H8Y5 726 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 SH2D2AQ9NP31 389 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 MMP25Q9NPA2 562 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PPANQ9NQ55 473 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 FARSBQ9NSD9 589 aaKnown RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 DNAJC11Q9NVH1 559 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 TEX10Q9NXF1 929 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-214ENST00000550893 NUDT4Q9NZJ9 180 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 PCTPQ9UKL6 214 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 DAPP1Q9UN19 280 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 ASB4Q9Y574 426 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 SPG11Q96JI7 2443 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 AKAP6Q13023 2319 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 DNHD1Q96M86 4753 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 F8P00451 2351 aa4.46□□□□□ -1.7
SCAF11-214ENST00000550893 MTORP42345 2549 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 HEATR5AQ86XA9 2040 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 A0A087WV62 115 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 A0A096LPK6 155 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 NSG1A0A0A6YYJ2 146 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 OR5H15A6NDH6 313 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 A8MT66 165 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 KDM4EB2RXH2 506 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 K7EPI3 171 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 UBFD1O14562 309 aaKnown RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 PFDN6O15212 129 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 RIPK2O43353 540 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ERI3O43414 337 aaKnown RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 SH3BGRLO75368 114 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 STK16O75716 305 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 KLHL2O95198 593 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 IGHEP01854 428 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 LCKP06239 509 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ANXA5P08758 320 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 STSP08842 583 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ABHD2P08910 425 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 CT62P0C5K7 136 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 SLC35G6P0C7Q6 338 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 CHN1P15882 459 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 STMN1P16949 149 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 S1PR1P21453 382 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ATP5A1P25705 553 aaKnown RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 STX2P32856 288 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 PAFAH1B1P43034 410 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 RFX2P48378 723 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 HNMTP50135 292 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 RAB38P57729 211 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 KCNK10P57789 538 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 MLF1P58340 268 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ATP6V0D1P61421 351 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 GALNT1Q10472 559 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 CHIT1Q13231 466 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 NAB1Q13506 487 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 SLMAPQ14BN4 828 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 HERC3Q15034 1050 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 PDK4Q16654 411 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 Q5PR19 223 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ACER2Q5QJU3 275 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ATPAF1Q5TC12 328 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 GRTP1Q5TC63 336 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 C18orf63Q68DL7 685 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 SULT1C3Q6IMI6 304 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 PGBD2Q6P3X8 592 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 TTC23LQ6PF05 361 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ISLR2Q6UXK2 745 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 MAATS1Q7Z4T9 603 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 KLBQ86Z14 1044 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 C9orf40Q8IXQ3 194 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 RPRMLQ8N4K4 120 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 L3MBTL4Q8NA19 623 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 CLEC1AQ8NC01 280 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ST6GALNAC3Q8NDV1 305 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 C7orf57Q8NEG2 295 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 DOK4Q8TEW6 326 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF721Q8TF20 911 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 FAR1Q8WVX9 515 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 NR4A3Q92570 626 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 N4BP2L2Q92802 583 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 HAS2Q92819 552 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 FER1L6-AS2Q96M78 137 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM237Q96Q45 408 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM204Q9BSN7 226 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 OR51B5Q9H339 312 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 LIN28AQ9H9Z2 209 aaKnown RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 IRAK4Q9NWZ3 460 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ANKRD10Q9NXR5 420 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 NSMCE4AQ9NXX6 385 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM216Q9P0N5 145 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 CES1P1Q9UKY3 287 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 EXO1Q9UQ84 846 aaKnown RBP4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF835Q9Y2P0 537 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 RNF11Q9Y3C5 154 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 ATG4BQ9Y4P1 393 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 LIPGQ9Y5X9 500 aa4.45□□□□□ -1.7
SCAF11-214ENST00000550893 PRRC2AP48634 2157 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms