RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 OR4Q3Q8NH05 313 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 GOT1L1Q8NHS2 421 aaPredicted RBP11.33□□□□□ -0.6
VDR-208ENST00000550325 ABHD4Q8TB40 342 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 MYLIPQ8WY64 445 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 OR1F2PQ96R84 312 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 TSNAXQ99598 290 aaKnown RBP11.33□□□□□ -0.6
VDR-208ENST00000550325 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
VDR-208ENST00000550325 ASB6Q9NWX5 421 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 ALPK3Q96L96 1907 aa11.33□□□□□ -0.6
VDR-208ENST00000550325 PRSS44E7EML9 344 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 STX11O75558 287 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 UBL3O95164 117 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 MAOBP27338 520 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 ATXN7L3Q14CW9 347 aaPredicted RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 TMEM255AQ5JRV8 349 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 PLEKHS1Q5SXH7 462 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 SLCO4C1Q6ZQN7 724 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 OVCH2Q7RTZ1 564 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 MRPL10Q7Z7H8 261 aaKnown RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 CFAP206Q8IYR0 622 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 OR5M1Q8NGP8 315 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 OR51Q1Q8NH59 317 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 FANK1Q8TC84 345 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 GNPDA2Q8TDQ7 276 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 WNT2BQ93097 391 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 CXorf40BQ96DE9 158 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 ARSGQ96EG1 525 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 C4orf36Q96KX1 117 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 A0A0G2JPF8 293 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 A0A1W2PRQ8 180 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 UBE2QL1A1L167 161 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 HNRNPCL3B7ZW38 293 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 GOSR2O14653 212 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 SUSD5O60279 629 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 HNRNPCL4P0DMR1 293 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 ZNF35P13682 527 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 CTSCP53634 463 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 MRPL58Q14197 206 aaKnown RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 DEFB115Q30KQ5 88 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 LRRC37A5PQ49AS3 106 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 CYB561A3Q8NBI2 242 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 C17orf47Q8NEP4 570 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 LGALS14Q8TCE9 139 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 SMPDL3AQ92484 453 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 TRMT61BQ9BVS5 477 aaKnown RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 NKX6-2Q9C056 277 aaPredicted RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 GPN1Q9HCN4 374 aaPredicted RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 ISYNA1Q9NPH2 558 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 BACE2Q9Y5Z0 518 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 ATF1P18846 271 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 CTSOP43234 321 aaPredicted RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 SEC61A1P61619 476 aaKnown RBP11.32□□□□□ -0.6
VDR-208ENST00000550325 SWI5Q1ZZU3 235 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 MPP7Q5T2T1 576 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 VASNQ6EMK4 673 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 HEPHL1Q6MZM0 1159 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 OR52I2Q8NH67 350 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 SLC25A18Q9H1K4 315 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
VDR-208ENST00000550325 WDPCPO95876 746 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 OR12D2P58182 307 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 ZDHHC20Q5W0Z9 365 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 C1orf94Q6P1W5 598 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 CHST9Q7L1S5 443 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 NKAIN4Q8IVV8 208 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 IL17RCQ8NAC3 791 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 C1orf216Q8TAB5 229 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 ZNF480Q8WV37 535 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 DMRTA2Q96SC8 542 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 SARGQ9BW04 601 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 HRASLSQ9HDD0 168 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 WSB2Q9NYS7 404 aaPredicted RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 MARK1Q9P0L2 795 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 CBLCQ9ULV8 474 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 FLRT2O43155 660 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 PRKRAO75569 313 aaKnown RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
VDR-208ENST00000550325 GATMP50440 423 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 HCCSP53701 268 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 STX4Q12846 297 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 ZNF311Q5JNZ3 666 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 TMEM185AQ8NFB2 350 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 BBS4Q96RK4 519 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 MYNNQ9NPC7 610 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
VDR-208ENST00000550325 IRAK3Q9Y616 596 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms