RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LIME1Q9H400 295 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 TIGARQ9NQ88 270 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 PLSCR4Q9NRQ2 329 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 BEX4Q9NWD9 120 aaPredicted RBP9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 SLC17A7Q9P2U7 560 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 TESMINQ9Y4I5 508 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 SNX8Q9Y5X2 465 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 MED12Q93074 2177 aa9.79□□□□□ -0.84
VTI1BP3-201ENST00000550220 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 MED13LQ71F56 2210 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EXPH5Q8NEV8 1989 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 DUXAA6NLW8 204 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EIF1AYO14602 144 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CTIFO43310 598 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SPAG7O75391 227 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CGAP01215 116 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 HMGN2P05204 90 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 BPGMP07738 259 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 ACP2P11117 423 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 LAMP1P11279 417 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 KLK2P20151 261 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 UGT2B10P36537 528 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EIF1AXP47813 144 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SUMO3P55854 103 aaPredicted RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CTBP2P56545 445 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CLDN20P56880 219 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 C21orf58P58505 322 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 VSNL1P62760 191 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EMX2Q04743 252 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 FAM27E3Q08E93 113 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SPDYE7PQ495Y7 208 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EXOSC6Q5RKV6 272 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 FIGNL1Q6PIW4 674 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CROCCP2Q86T23 111 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 STK32CQ86UX6 486 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR5M1Q8NGP8 315 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 OR6K3Q8NGY3 331 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SFXN5Q8TD22 340 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 AENQ8WTP8 325 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 PIGTQ969N2 578 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 TUBGCP3Q96CW5 907 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 CHMP6Q96FZ7 201 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 C16orf58Q96GQ5 468 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 REXO5Q96IC2 774 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 MED18Q9BUE0 208 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 MECRQ9BV79 373 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SSU72Q9NP77 194 aaKnown RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 SIRT3Q9NTG7 399 aaPredicted RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 MED17Q9NVC6 651 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 VDAC3Q9Y277 283 aa9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.78□□□□□ -0.84
VTI1BP3-201ENST00000550220 DOCK7Q96N67 2140 aa9.77□□□□□ -0.84
VTI1BP3-201ENST00000550220 C17orf51A8MQB3 221 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMEM233B4DJY2 109 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 H0YC42 278 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 HAX1O00165 279 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 BIRC5O15392 142 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 CFLARO15519 480 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ARHGEF9O43307 516 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 TYROBPO43914 113 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 AK1P00568 194 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 TUBBP07437 444 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 FPR1P21462 350 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ELK4P28324 431 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 TPD52P55327 224 aaPredicted RBP9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 CLDN8P56748 225 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 CARD18P57730 90 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 SIRPAP78324 504 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 LASP1Q14847 261 aaKnown RBP9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 PTGR1Q14914 329 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 GUSBP1Q15486 140 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 PLPPR5Q32ZL2 321 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 SHEQ5VZ18 495 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 VWA1Q6PCB0 445 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 PLXDC2Q6UX71 529 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 BEND4Q6ZU67 534 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 GGNQ86UU5 652 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 LRRC34Q8IZ02 419 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 MREGQ8N565 214 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF610Q8N9Z0 462 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 VPS37AQ8NEZ2 397 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR7A2PQ8NGA2 310 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR10D3Q8NH80 312 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR2V1Q8NHB1 315 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 AGR3Q8TD06 166 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OIT3Q8WWZ8 545 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 WFIKKN1Q96NZ8 548 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 PIP5K1AQ99755 562 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 DUSP26Q9BV47 211 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OPN3Q9H1Y3 402 aaPredicted RBP9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 OR10A4Q9H209 315 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 GP6Q9HCN6 339 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ASIC5Q9NY37 505 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 NOP53Q9NZM5 478 aaKnown RBP9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZDHHC2Q9UIJ5 367 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 PCDHGB4Q9UN71 923 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ACTL7BQ9Y614 415 aa9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 GPC6Q9Y625 555 aaPredicted RBP9.77□□□□□ -0.85
VTI1BP3-201ENST00000550220 ITPR3Q14573 2671 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms