RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 VEZF1Q14119 521 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 WHAMMP3Q1A5X7 153 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 CLEC12BQ2HXU8 276 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 ESPNLQ6ZVH7 1005 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 SZRD1Q7Z422 152 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 STK32CQ86UX6 486 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 SPATA3Q8NHX4 192 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 OSTF1Q92882 214 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 NEUROG1Q92886 237 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 ZBTB8AQ96BR9 441 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 GIMAP5Q96F15 307 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
RAB5C-205ENST00000550013 OR10A4Q9H209 315 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 FANCFQ9NPI8 374 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 CCL27Q9Y4X3 112 aa13.74□□□□□ -0.21
RAB5C-205ENST00000550013 OVOL3O00110 214 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 AKAP10O43572 662 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 SEC22BO75396 215 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 CRCPO75575 148 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 GCM2O75603 506 aaPredicted RBP13.73□□□□□ -0.21
RAB5C-205ENST00000550013 KCNK2O95069 426 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 GSTA1P08263 222 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 MYL2P10916 166 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ME2P23368 584 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 SFTPDP35247 375 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 PRIM2P49643 509 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 KIAA0040Q15053 153 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 DUSP5Q16690 384 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 VPS26BQ4G0F5 336 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ZYG11AQ6WRX3 759 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ATG4DQ86TL0 474 aaPredicted RBP13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ZNF619Q8N2I2 560 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 CDRT4Q8N9R6 151 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 SLC16A11Q8NCK7 471 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 NUP43Q8NFH3 380 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 STEAP2Q8NFT2 490 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 FAM110BQ8TC76 370 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ACMSDQ8TDX5 336 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ACTRT2Q8TDY3 377 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 ABHD3Q8WU67 409 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 C16orf58Q96GQ5 468 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 KLHL15Q96M94 604 aa13.73□□□□□ -0.21
RAB5C-205ENST00000550013 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
RAB5C-205ENST00000550013 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
RAB5C-205ENST00000550013 CLOCKO15516 846 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 RIPK2O43353 540 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 SOD3P08294 240 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 EFNA1P20827 205 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-205ENST00000550013 RNF144AP50876 292 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CARD18P57730 90 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 DMTNQ08495 405 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 FOXF1Q12946 379 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CD226Q15762 336 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
RAB5C-205ENST00000550013 PDSS1Q5T2R2 415 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CCNJQ5T5M9 372 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CLEC6AQ6EIG7 209 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 ADAM5Q6NVV9 412 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 TRABD2AQ86V40 505 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 LILRA2Q8N149 483 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 GABRG1Q8N1C3 465 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 OR6Y1Q8NGX8 325 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CEP70Q8NHQ1 597 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 RNF128Q8TEB7 428 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 MZB1Q8WU39 189 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 CCDC126Q96EE4 140 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 C16orf45Q96MC5 204 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-205ENST00000550013 MS4A4EQ96PG1 132 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 UBQLN4Q9NRR5 601 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 NTMQ9P121 344 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 TBK1Q9UHD2 729 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
RAB5C-205ENST00000550013 A0A1W2PPM1 405 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 NPIPB8E9PQR5 432 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 OIP5O43482 229 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 EFNA2O43921 213 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 PROCP04070 461 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 LINGO3P0C6S8 592 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 DANCRP0C864 163 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 SDC1P18827 310 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 CDKN1AP38936 164 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 MANFP55145 182 aaKnown RBP13.71□□□□□ -0.21
RAB5C-205ENST00000550013 TAB1Q15750 504 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 NCMAPQ5T1S8 102 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 GTF2IRD2BQ6EKJ0 949 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 GTF2IRD2Q86UP8 949 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 TUSC5Q8IXB3 177 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 CLHC1Q8NHS4 586 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 B4GALNT2Q8NHY0 566 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 PPCDCQ96CD2 204 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 TSSK3Q96PN8 268 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 REG4Q9BYZ8 158 aa13.71□□□□□ -0.21
RAB5C-205ENST00000550013 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms