RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 DUSP22Q9NRW4 184 aa12.06□□□□□ -0.48
GCN1-206ENST00000549815 ZCCHC3Q9NUD5 404 aaKnown RBP12.06□□□□□ -0.48
GCN1-206ENST00000549815 MED17Q9NVC6 651 aa12.06□□□□□ -0.48
GCN1-206ENST00000549815 GIN1Q9NXP7 522 aa12.06□□□□□ -0.48
GCN1-206ENST00000549815 ELOVL5Q9NYP7 299 aa12.06□□□□□ -0.48
GCN1-206ENST00000549815 NDRG3Q9UGV2 375 aa12.06□□□□□ -0.48
GCN1-206ENST00000549815 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
GCN1-206ENST00000549815 SLU7O95391 586 aaKnown RBP12.05□□□□□ -0.48
GCN1-206ENST00000549815 NID1P14543 1247 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 UGT2B10P36537 528 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 SERPINB4P48594 390 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 POU6F2P78424 691 aaPredicted RBP12.05□□□□□ -0.48
GCN1-206ENST00000549815 KEAP1Q14145 624 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 FGFBP1Q14512 234 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 ATP6AP1LQ52LC2 224 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 CPTPQ5TA50 214 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 IL23RQ5VWK5 629 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 CDC73Q6P1J9 531 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 WDR93Q6P2C0 686 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 C22orf34Q6ZV56 151 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 KRTAP1-3Q8IUG1 177 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 MISPQ8IVT2 679 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 KRTCAP2Q8N6L1 136 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 ZNF610Q8N9Z0 462 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 CDS1Q92903 461 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 CAVIN3Q969G5 261 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 MARK4Q96L34 752 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 GPATCH2Q9NW75 528 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 KLHL28Q9NXS3 571 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 KCNE3Q9Y6H6 103 aa12.05□□□□□ -0.48
GCN1-206ENST00000549815 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 EIF1AYO14602 144 aaKnown RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 CASKO14936 926 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 ADAMDEC1O15204 470 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 SS18L1O75177 396 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 SKAP2O75563 359 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 LYPLA1O75608 230 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 HSPA4LO95757 839 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 C6orf47O95873 294 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 LINGO3P0C6S8 592 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 FCGR2AP12318 317 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 POU2F1P14859 743 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 DDX5P17844 614 aaKnown RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 IL11P20809 199 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 CRYGSP22914 178 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 LOXP28300 417 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 HOXC12P31275 282 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 EIF1AXP47813 144 aaKnown RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 C21orf58P58505 322 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 RAC1P63000 192 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 IFFO1Q0D2I5 559 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 SGCBQ16585 318 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 EMBQ6PCB8 327 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 CXorf67Q86X51 503 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 NATD1Q8N6N6 113 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 FNDC5Q8NAU1 212 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 OR10D3Q8NH80 312 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 JADE3Q92613 823 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 SH3YL1Q96HL8 342 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 RNF145Q96MT1 663 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 ACTRT3Q9BYD9 372 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 PLSCR4Q9NRQ2 329 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 C6orf203Q9P0P8 240 aaPredicted RBP12.04□□□□□ -0.48
GCN1-206ENST00000549815 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
GCN1-206ENST00000549815 A0A0J9YW62 118 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 NPIPB9F8W1W9 429 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 SCDO00767 359 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 OIP5O43482 229 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 EFNA2O43921 213 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 CXCL13O43927 109 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 DIAPH2O60879 1101 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 OPN1LWP04000 364 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 G6PDP11413 515 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 CCT3P49368 545 aaKnown RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 PPP2R2AP63151 447 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 ZNF117Q03924 483 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 KLHL26Q53HC5 615 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
GCN1-206ENST00000549815 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 ESPNLQ6ZVH7 1005 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 ZNF550Q7Z398 422 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 MTERF4Q7Z6M4 381 aaKnown RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 MREGQ8N565 214 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 WFDC11Q8NEX6 87 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 OR56A1Q8NGH5 318 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 OR6K3Q8NGY3 331 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 SFXN5Q8TD22 340 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 ZNF524Q96C55 264 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 GMPPAQ96IJ6 420 aaPredicted RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 SLC39A3Q9BRY0 314 aa12.03□□□□□ -0.48
GCN1-206ENST00000549815 BHLHE41Q9C0J9 482 aaPredicted RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 ZNF395Q9H8N7 513 aaPredicted RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 PAQR5Q9NXK6 330 aaPredicted RBP12.03□□□□□ -0.48
GCN1-206ENST00000549815 ASIC5Q9NY37 505 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms