RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	USP24	Q9UPU5	2620 aa		11.22	□□□□□ -0.61
ERBB3-208	ENST00000549205		A6NL46	340 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205		H0Y3Z8	333 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205		H3BNH8	94 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	HNRNPR	O43390	633 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	TIPRL	O75663	272 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	CSTA	P01040	98 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	MT-ND1	P03886	318 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	IFNW1	P05000	195 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	FABP3	P05413	133 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	OR1E2	P47887	323 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	ST13	P50502	369 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	RPP38	P78345	283 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	VLDLR	P98155	873 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	PLAUR	Q03405	335 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	TLE3	Q04726	772 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	IQCC	Q4KMZ1	466 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	AGAP7P	Q5VUJ5	663 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	BROX	Q5VW32	411 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	IL20RB	Q6UXL0	311 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	GRAMD2A	Q8IUY3	354 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	ZDHHC21	Q8IVQ6	265 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	GPALPP1	Q8IXQ4	340 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	BEST3	Q8N1M1	668 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	FAM71C	Q8NEG0	241 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	OR4D11	Q8NGI4	311 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	GRHL3	Q8TE85	626 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	CNOT9	Q92600	299 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	SLC35B4	Q969S0	331 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	AGAP4	Q96P64	663 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	DCBLD2	Q96PD2	775 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	NODAL	Q96S42	347 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	SECISBP2	Q96T21	854 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	WFDC6	Q9BQY6	131 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	TBL1XR1	Q9BZK7	514 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	EVA1A	Q9H8M9	152 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	HPF1	Q9NWY4	346 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	DNAJB12	Q9NXW2	375 aa	Known RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	STMN3	Q9NZ72	180 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	ABI3	Q9P2A4	366 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	RAX	Q9Y2V3	346 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	KCNMB2	Q9Y691	235 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	ATRX	P46100	2492 aa		11.21	□□□□□ -0.61
ERBB3-208	ENST00000549205	NCKAP5	O14513	1909 aa		11.21	□□□□□ -0.62
ERBB3-208	ENST00000549205	MED19	A0JLT2	244 aa	Predicted RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	hCG_2039718	K7EN88	272 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205		M0R3H8	397 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	CDK2AP1	O14519	115 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	FRS3	O43559	492 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	NDUFB5	O43674	189 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	BCAS1	O75363	584 aa	Predicted RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	ATP6V1G2	O95670	118 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	UBL4A	P11441	157 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	FCGR1A	P12314	374 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	ENDOU	P21128	410 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	CLK3	P49761	638 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RGS8	P57771	180 aa	Predicted RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RAPSN	Q13702	412 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	CD226	Q15762	336 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	TMEM81	Q6P7N7	255 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	ISLR2	Q6UXK2	745 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RTL4	Q6ZR62	310 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	TSEN54	Q7Z6J9	526 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	MARCH3	Q86UD3	253 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RBM45	Q8IUH3	476 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	LACC1	Q8IV20	430 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	CYP4Z2P	Q8N1L4	340 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	GATS	Q8NAP1	163 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	OR6T1	Q8NGN1	323 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	SGCZ	Q96LD1	299 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RTN4R	Q9BZR6	473 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	AMBRA1	Q9C0C7	1298 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	METTL7A	Q9H8H3	244 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	RNPEPL1	Q9HAU8	725 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	SH2D2A	Q9NP31	389 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	EXOSC3	Q9NQT5	275 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	AGPAT4	Q9NRZ5	378 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	NDUFAF4	Q9P032	175 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	STX18	Q9P2W9	335 aa	Known RBP	11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	ENPP4	Q9Y6X5	453 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	EPG5	Q9HCE0	2579 aa		11.2	□□□□□ -0.62
ERBB3-208	ENST00000549205	C1QTNF9B	B2RNN3	333 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	GTPBP1	O00178	669 aa	Known RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ADAM10	O14672	748 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	OIP5	O43482	229 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	SCO2	O43819	266 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	EIF4E2	O60573	245 aa	Known RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	CEACAM4	O75871	244 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ANGPTL1	O95841	491 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	C1QTNF9	P0C862	333 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	UBTFL6	P0CB48	400 aa	Predicted RBP	11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ANPEP	P15144	967 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	ITGA2	P17301	1181 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	FAS	P25445	335 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	CASR	P41180	1078 aa		11.19	□□□□□ -0.62
ERBB3-208	ENST00000549205	CYB561	P49447	251 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms