RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SS18L1O75177 396 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 ALOX5P09917 674 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 LOXP28300 417 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 ARRB2P32121 409 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 KCNJ5P48544 419 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 ZNF41P51814 821 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 PPP4R4Q6NUP7 873 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 ZCCHC12Q6PEW1 402 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 R3HCC1LQ7Z5L2 792 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 WDR75Q8IWA0 830 aaKnown RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 RIBC1Q8N443 379 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 OR6K3Q8NGY3 331 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 POC1BQ8TC44 478 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 ACTRT2Q8TDY3 377 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 CAVIN3Q969G5 261 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 SH3YL1Q96HL8 342 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 GMPPAQ96IJ6 420 aaPredicted RBP15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 RNF145Q96MT1 663 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 UBQLN4Q9NRR5 601 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 CLEC4AQ9UMR7 237 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 EMC9Q9Y3B6 208 aa15.59■□□□□ 0.09
CHMP1A-205ENST00000548650 PRR14LQ5THK1 2151 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 A0A1W2PQD3 144 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 TMEM114B3SHH9 223 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 SCDO00767 359 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 ADAMDEC1O15204 470 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 HMGN2P05204 90 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 NUDT17P0C025 328 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 SERPINB4P48594 390 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 PRIM2P49643 509 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 POU6F2P78424 691 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 NKX6-1P78426 367 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 LASP1Q14847 261 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 PTGR1Q14914 329 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 LRIG3Q6UXM1 1119 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 ZCCHC23Q6ZST2 131 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 BIVMQ86UB2 503 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 MISPQ8IVT2 679 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 OR7A2PQ8NGA2 310 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 AGR3Q8TD06 166 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 CDS1Q92903 461 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 ZC3HAV1LQ96H79 300 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 PPP3R2Q96LZ3 170 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 STACQ99469 402 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 PIP5K1AQ99755 562 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 BTBD2Q9BX70 525 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 TMEM185BQ9H7F4 350 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 ANKZF1Q9H8Y5 726 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 DUSP22Q9NRW4 184 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 PAQR5Q9NXK6 330 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 STOML1Q9UBI4 398 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 LGALS13Q9UHV8 139 aa15.58■□□□□ 0.08
CHMP1A-205ENST00000548650 TLDC2A0PJX2 215 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 TNFSF11O14788 317 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 CXCL13O43927 109 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 HSPA4LO95757 839 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 LINGO3P0C6S8 592 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 LAMP1P11279 417 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 IL11P20809 199 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 MAPK1P28482 360 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 RPL3P39023 403 aaKnown RBP15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 RAC1P63000 192 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 ZNF117Q03924 483 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 EXOC3L2Q2M3D2 409 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 Q5PR19 223 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 SHEQ5VZ18 495 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 ESPNLQ6ZVH7 1005 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 HOMEZQ8IX15 550 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 OR2V1Q8NHB1 315 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 PSMA8Q8TAA3 256 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 C18orf12Q96KH6 178 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 C3orf30Q96M34 536 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 SMR3AQ99954 134 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 C1orf50Q9BV19 199 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 PRRG4Q9BZD6 226 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 PIGUQ9H490 435 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 UBTD1Q9HAC8 227 aa15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 EML4Q9HC35 981 aaKnown RBP15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 MCTS1Q9ULC4 181 aaKnown RBP15.57■□□□□ 0.08
CHMP1A-205ENST00000548650 A0A0J9YW62 118 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 OIP5O43482 229 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 PEX11AO75192 247 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 SPAG7O75391 227 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 PLGP00747 810 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 OPN1LWP04000 364 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 THBDP07204 575 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 NID1P14543 1247 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 HPGDP15428 266 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 DDX5P17844 614 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 SHC1P29353 583 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 FOXF1Q12946 379 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 ACKR1Q16570 336 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 CPTPQ5TA50 214 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 ANKRD34AQ69YU3 496 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 CDC73Q6P1J9 531 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 STAC2Q6ZMT1 411 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 LRRC75A-AS1Q8N1F1 130 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 B4GALNT2Q8NHY0 566 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 TCP10LQ8TDR4 215 aa15.56■□□□□ 0.08
CHMP1A-205ENST00000548650 NUDT8Q8WV74 236 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms