RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PLPPR2Q96GM1 343 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 C16orf58Q96GQ5 468 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 ADGRG7Q96K78 797 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 ACTR6Q9GZN1 396 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 OXSMQ9NWU1 459 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 GIN1Q9NXP7 522 aa18.22■□□□□ 0.51
SSH1-207ENST00000547862 NPIPA5A0A0B4J1W7 369 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 A0A0J9YW62 118 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 NPIPA7E9PJI5 369 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 AZIN1O14977 448 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 NUDT14O95848 222 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 NPIPA8P0DM63 369 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 NEFHP12036 1026 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 PRPH2P23942 346 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 SHC1P29353 583 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 PRIM2P49643 509 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 FOXF1Q12946 379 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 CD226Q15762 336 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSH1-207ENST00000547862 C10orf107Q8IVU9 208 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 EPS8L3Q8TE67 593 aaKnown RBP18.21■□□□□ 0.51
SSH1-207ENST00000547862 TMEM171Q8WVE6 324 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 ROBO4Q8WZ75 1007 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 ZBTB8AQ96BR9 441 aa18.21■□□□□ 0.51
SSH1-207ENST00000547862 IQCGQ9H095 443 aaKnown RBP18.21■□□□□ 0.51
SSH1-207ENST00000547862 TMEM233B4DJY2 109 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 KLF4O43474 513 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 CHEK2O96017 543 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 IFI6P09912 130 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 NID1P14543 1247 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 IL11P20809 199 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 AGTR1P30556 359 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 MAP3K8P41279 467 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 CCT5P48643 541 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 POU6F2P78424 691 aaPredicted RBP18.2■□□□□ 0.5
SSH1-207ENST00000547862 OCRLQ01968 901 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 LASP1Q14847 261 aaKnown RBP18.2■□□□□ 0.5
SSH1-207ENST00000547862 PCLAFQ15004 111 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 TSC22D1Q15714 1073 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 PRSS57Q6UWY2 283 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 STK32CQ86UX6 486 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 ZNF619Q8N2I2 560 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 OR6Y1Q8NGX8 325 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 B4GALNT2Q8NHY0 566 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 POC1BQ8TC44 478 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 AGR3Q8TD06 166 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 CDS1Q92903 461 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 KLHL15Q96M94 604 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 TUBB1Q9H4B7 451 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 PLSCR4Q9NRQ2 329 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 ZCCHC3Q9NUD5 404 aaKnown RBP18.2■□□□□ 0.5
SSH1-207ENST00000547862 PAQR5Q9NXK6 330 aaPredicted RBP18.2■□□□□ 0.5
SSH1-207ENST00000547862 GIMAP2Q9UG22 337 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 SNX8Q9Y5X2 465 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 TLN2Q9Y4G6 2542 aa18.2■□□□□ 0.5
SSH1-207ENST00000547862 USF3Q68DE3 2245 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 INAFM1C9JVW0 142 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 CNOT4O95628 575 aaKnown RBP18.19■□□□□ 0.5
SSH1-207ENST00000547862 NTN1O95631 604 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 TUBBP07437 444 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 NGFRP08138 427 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 PPP3CBP16298 524 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 CRHR1P34998 444 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 HPCAL1P37235 193 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 NR1H2P55055 460 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 RAC1P63000 192 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ZNF844Q08AG5 666 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 RFTN2Q52LD8 501 aaPredicted RBP18.19■□□□□ 0.5
SSH1-207ENST00000547862 PDSS1Q5T2R2 415 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 Q6ZSR9 355 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 BEND4Q6ZU67 534 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 SH2D5Q6ZV89 423 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ESPNLQ6ZVH7 1005 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ZNF614Q8N883 585 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ATP6V1C2Q8NEY4 427 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 KIF18AQ8NI77 898 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 PHOSPHO1Q8TCT1 267 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ABHD3Q8WU67 409 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 HOXB13Q92826 284 aaPredicted RBP18.19■□□□□ 0.5
SSH1-207ENST00000547862 FAM120BQ96EK7 910 aaKnown RBP18.19■□□□□ 0.5
SSH1-207ENST00000547862 FCRL1Q96LA6 429 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 GATA5Q9BWX5 397 aaPredicted RBP18.19■□□□□ 0.5
SSH1-207ENST00000547862 GSX2Q9BZM3 304 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 FANCFQ9NPI8 374 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 UBQLN4Q9NRR5 601 aa18.19■□□□□ 0.5
SSH1-207ENST00000547862 ZANQ9Y493 2812 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 LSM1O15116 133 aaKnown RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 KRT4P19013 534 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 PSMA4P25789 261 aaKnown RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 ATP5J2P56134 94 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 PPP2R2BQ00005 443 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 ZNF117Q03924 483 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 PDE7AQ13946 482 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 NDUFAF6Q330K2 333 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 CPTPQ5TA50 214 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 KANK2Q63ZY3 851 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 PRIMA1Q86XR5 153 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 LILRA2Q8N149 483 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 LRRN4CLQ8ND94 238 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 TWIST2Q8WVJ9 160 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms