RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 CCNA2P20248 432 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 AHCYP23526 432 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 KIR2DS2P43631 304 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 DHPSP49366 369 aaPredicted RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 TIMM10P62072 90 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 MRPS11P82912 194 aaKnown RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 PLOD1Q02809 727 aaPredicted RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 UBE2V2Q15819 145 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 CFAP221Q4G0U5 840 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 LRRC70Q7Z2Q7 622 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 C20orf203Q8NBC4 194 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 SUMF2Q8NBJ7 301 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 MSANTD4Q8NCY6 345 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 OR2A12Q8NGT7 310 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 URGCPQ8TCY9 931 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 RDH5Q92781 318 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 ADIPOR1Q96A54 375 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 ELMO2Q96JJ3 720 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 SLC30A2Q9BRI3 323 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 COMMD4Q9H0A8 199 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 COG4Q9H9E3 785 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 CWC25Q9NXE8 425 aaPredicted RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 CD274Q9NZQ7 290 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 OR1A1Q9P1Q5 309 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 ZNF223Q9UK11 482 aaPredicted RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 PSG11Q9UQ72 335 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 STRAPQ9Y3F4 350 aaKnown RBP2.27□□□□□ -2.05
CCDC38-204ENST00000546816 MYO10Q9HD67 2058 aa2.27□□□□□ -2.05
CCDC38-204ENST00000546816 TUBAL3A6NHL2 446 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 C19orf81C9J6K1 198 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 IGHV3-48P01763 117 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 OR8U8P0C7N1 319 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 THRBP10828 461 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 IGLL1P15814 213 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 DPP4P27487 766 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 NTSP30990 170 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 NUDT1P36639 197 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 RPL29P47914 159 aaKnown RBP2.26□□□□□ -2.05
CCDC38-204ENST00000546816 VLDLRP98155 873 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 ZNF154Q13106 437 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CBX3Q13185 183 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 PDIA5Q14554 519 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 KARSQ15046 597 aaKnown RBP2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CCDC40Q4G0X9 1142 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CCDC184Q52MB2 194 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 C1QTNF12Q5T7M4 302 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 SLX4IPQ5VYV7 408 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 PVRIGQ6DKI7 326 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CCNYQ8ND76 341 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 FAM71CQ8NEG0 241 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 OR9A4Q8NGU2 314 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 NEIL3Q8TAT5 605 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 NSMCE2Q96MF7 247 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CHRDL1Q9BU40 450 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 TBC1D10AQ9BXI6 508 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 ALDH8A1Q9H2A2 487 aaPredicted RBP2.26□□□□□ -2.05
CCDC38-204ENST00000546816 ZDHHC11Q9H8X9 412 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 MMP26Q9NRE1 261 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 NECAP2Q9NVZ3 263 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CYTH4Q9UIA0 394 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 RNF6Q9Y252 685 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 WDR45Q9Y484 360 aa2.26□□□□□ -2.05
CCDC38-204ENST00000546816 CCDC7Q96M83 1385 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 UBE4BO95155 1302 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 SAGE2PA6NJ88 616 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 WASHC1A8K0Z3 465 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 FAM166BA8MTA8 275 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 PDHBP11177 359 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 VDAC1P21796 283 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 HTR1EP28566 365 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 NMT1P30419 496 aaKnown RBP2.25□□□□□ -2.05
CCDC38-204ENST00000546816 BTDP43251 543 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 GAMTQ14353 236 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 C16orf72Q14CZ0 275 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 AANATQ16613 207 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 FAM120AOSQ5T036 256 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 HSD11B1LQ7Z5J1 315 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 RABEPKQ7Z6M1 372 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 SKA3Q8IX90 412 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 RNF148Q8N7C7 305 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 ZSCAN4Q8NAM6 433 aaPredicted RBP2.25□□□□□ -2.05
CCDC38-204ENST00000546816 DNAJA4Q8WW22 397 aaPredicted RBP2.25□□□□□ -2.05
CCDC38-204ENST00000546816 RUFY1Q96T51 708 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 NFKBIZQ9BYH8 718 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 VCXQ9H320 206 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 PPDPFQ9H3Y8 114 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 LPAR2Q9HBW0 351 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 GDAP2Q9NXN4 497 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 P2RX2Q9UBL9 471 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 ZNF282Q9UDV7 671 aaPredicted RBP2.25□□□□□ -2.05
CCDC38-204ENST00000546816 CRLS1Q9UJA2 301 aa2.25□□□□□ -2.05
CCDC38-204ENST00000546816 SMIM28A0A1B0GU29 152 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 RNF222A6NCQ9 220 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 CFAP73A6NFT4 308 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 H0YL77 283 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 EFNA2O43921 213 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 UQCRBP14927 111 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 ADORA2BP29275 332 aa2.24□□□□□ -2.05
CCDC38-204ENST00000546816 PRDX2P32119 198 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms